C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitin specific peptidase 36
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000144153 Usp36-003 ENSMUSG00000033909 10090 - 11:118262388-118290180 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonLungOvaryPlacentaTestisENSMUST00000144153
Transcript ID Adrenal Brain Breast Colon Lung Ovary Placenta Testis
ENSMUST00000144153 2.606±0.30 2.293±0.00 3.219±0.12 2.290±0.50 2.044±0.00 3.093±0.29 4.279±1.42 0.828±0.17

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00062I CIL_00062I_0002 CGP 11:118132019-118290244
CIL_0003UE CIL_0003UE_0003 CGP 11:118259651-118355740

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006511 IEA ubiquitin-dependent protein catabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000312010 USP36-201 protein_coding Homo_sapiens 0 1788
ENST00000449938 USP36-202 protein_coding Homo_sapiens 0 1417
ENST00000542802 USP36-003 protein_coding Homo_sapiens 0 1788
ENST00000586066 USP36-021 protein_coding Homo_sapiens 0 813
ENST00000586531 USP36-012 protein_coding Homo_sapiens 0 335
ENST00000586896 USP36-015 protein_coding Homo_sapiens 0 267
ENST00000588086 USP36-008 non_stop_decay Homo_sapiens 0 1788
ENST00000588467 USP36-024 processed_transcript Homo_sapiens 0 569
ENST00000589225 USP36-009 nonsense_mediated_decay Homo_sapiens 0 1788
ENST00000589254 USP36-023 retained_intron Homo_sapiens 0 357
ENST00000589424 USP36-018 protein_coding Homo_sapiens 0 508
ENST00000590312 USP36-025 retained_intron Homo_sapiens 0 508
ENST00000590546 USP36-002 protein_coding Homo_sapiens 0 508
ENST00000591942 USP36-013 nonsense_mediated_decay Homo_sapiens 0 231

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