C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: IQ motif and Sec7 domain 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000101153 Iqsec1-202 ENSMUSG00000034312 10090 - 6:90659598-90716529 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000101153
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000101153 9.239±2.14 9.232±1.85 2.472±0.00 1.942±0.00 11.240±2.64 6.512±1.20 4.357±0.35 12.085±0.11 2.970±1.52 15.957±1.76 2.104±0.29 7.164±1.49 3.624±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00051B CIL_00051B_0002 CGP 6:90659598-91116829

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005086 IBA ARF guanyl-nucleotide exchange factor activity
GO:0005634 IBA nucleus
GO:0030036 IBA actin cytoskeleton organization
GO:0030054 IBA cell junction
GO:0032012 IEA regulation of ARF protein signal transduction
GO:0043547 IEA positive regulation of GTPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000092344 protein_coding Danio_rerio 0 992
ENSDART00000137037 iqsec3b-001 protein_coding Danio_rerio 0 311
ENST00000273221 IQSEC1-001 protein_coding Homo_sapiens 0 3600
ENST00000375365 IQSEC2-009 protein_coding Homo_sapiens 0 558
ENST00000396435 IQSEC2-012 protein_coding Homo_sapiens 0 558
ENST00000473088 IQSEC1-004 processed_transcript Homo_sapiens 0 549
ENST00000613206 IQSEC1-003 protein_coding Homo_sapiens 0 3369
ENST00000618604 IQSEC1-002 protein_coding Homo_sapiens 0 3280

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