C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: IQ motif and Sec7 domain 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000101151 Iqsec1-201 ENSMUSG00000034312 10090 - 6:90659598-90810123 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000101151
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000101151 4.444±0.00 4.666±1.16 4.191±0.00 14.874±7.70 9.230±4.25 5.499±0.00 4.731±1.00 9.223±2.73 2.386±1.49 7.596±3.27 7.071±0.82 2.869±0.00 3.990±1.63

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00051B CIL_00051B_0002 CGP 6:90659598-91116829

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005086 IBA ARF guanyl-nucleotide exchange factor activity
GO:0005634 IBA nucleus
GO:0030036 IBA actin cytoskeleton organization
GO:0030054 IBA cell junction
GO:0032012 IEA regulation of ARF protein signal transduction
GO:0043547 IEA positive regulation of GTPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000092344 protein_coding Danio_rerio 0 1003
ENSDART00000137037 iqsec3b-001 protein_coding Danio_rerio 0 311
ENST00000273221 IQSEC1-001 protein_coding Homo_sapiens 0 3369
ENST00000375365 IQSEC2-009 protein_coding Homo_sapiens 0 558
ENST00000396435 IQSEC2-012 protein_coding Homo_sapiens 0 558
ENST00000473088 IQSEC1-004 processed_transcript Homo_sapiens 0 549
ENST00000613206 IQSEC1-003 protein_coding Homo_sapiens 0 3603
ENST00000618604 IQSEC1-002 protein_coding Homo_sapiens 0 3280

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