C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: highly divergent homeobox
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000038472 Hdx-002 ENSMUSG00000034551 10090 - X:111569933-111697079 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000038472
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000038472 0.050±0.02 0.036±0.01 0.246±0.17 0.039±0.00 0.012±0.00 0.011±0.01 0.014±0.00 0.018±0.01 0.073±0.01 0.018±0.01 0.137±0.06 0.044±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003KW CIL_0003KW_0002 CGP X:111388192-111697079

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005575 ND cellular_component
GO:0005634 IEA nucleus
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000297977 HDX-003 protein_coding Homo_sapiens 0 2588
ENST00000373177 HDX-002 protein_coding Homo_sapiens 0 2588
ENST00000404136 CWC22-002 protein_coding Homo_sapiens 0 1520
ENST00000410053 CWC22-001 protein_coding Homo_sapiens 0 1659
ENST00000449553 HDX-005 protein_coding Homo_sapiens 0 861
ENST00000472135 HDX-004 retained_intron Homo_sapiens 0 1487
ENST00000506585 HDX-001 protein_coding Homo_sapiens 0 2588

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