C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: highly divergent homeobox
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000113422 Hdx-001 ENSMUSG00000034551 10090 - X:111569931-111697079 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainLiverLungOvaryPlacentaTestisENSMUST00000113422
Transcript ID Adrenal Brain Liver Lung Ovary Placenta Testis
ENSMUST00000113422 0.053±0.00 0.216±0.11 0.007±0.01 0.129±0.01 0.090±0.03 0.070±0.02 0.029±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003KW CIL_0003KW_0002 CGP X:111388192-111697079

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005575 ND cellular_component
GO:0005634 IEA nucleus
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000297977 HDX-003 protein_coding Homo_sapiens 0 2939
ENST00000373177 HDX-002 protein_coding Homo_sapiens 0 2854
ENST00000404136 CWC22-002 protein_coding Homo_sapiens 0 1520
ENST00000410053 CWC22-001 protein_coding Homo_sapiens 0 1659
ENST00000449553 HDX-005 protein_coding Homo_sapiens 0 778
ENST00000472135 HDX-004 retained_intron Homo_sapiens 0 1487
ENST00000506585 HDX-001 protein_coding Homo_sapiens 0 2590

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