C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: family with sequence similarity 171, member A2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000034685 Fam171a2 10090 - 11:102436981-102447682 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000049057 Fam171a2-001 102436981-102447682 protein_coding
  ENSMUST00000145190 Fam171a2-002 102438748-102439777 processed_transcript
  ENSMUST00000152015 Fam171a2-003 102440233-102447594 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLungOvaryTestisENSMUST00000049057
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Lung Ovary Testis
ENSMUST00000049057 19.899±0.21 6.106±0.90 48.473±11.10 9.016±0.55 4.830±0.61 5.934±0.00 6.836±0.24 20.723±4.66 0.864±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009B6 CIL_0009B6_0002 VISTA 11:102063033-102664797
CIL_0007ST CIL_0007ST_0002 VISTA 11:102292756-102896210
CIL_0005J8 CIL_0005J8_0002 CGP 11:102402985-102437048
CIL_0005J7 CIL_0005J7_0002 CGP 11:102430315-102447682
CIL_0004D6 CIL_0004D6_0003 CGP 11:102436981-102470122

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000075249 fam171a2 family with sequence similarity 171, member A2 protein_coding Danio_rerio
ENSDARG00000079656 FAM171A2 (2 of 2) family with sequence similarity 171, member A2 protein_coding Danio_rerio
ENSG00000161682 FAM171A2 family with sequence similarity 171, member A2 protein_coding Homo_sapiens

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