C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: protein phosphatase 1, regulatory subunit 21
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000034709 Ppp1r21 10090 + 17:88530118-88588367 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000038551 Ppp1r21-001 88530118-88588367 protein_coding
  ENSMUST00000185400 Ppp1r21-003 88578730-88588365 retained_intron
  ENSMUST00000188064 Ppp1r21-006 88575076-88577324 retained_intron
  ENSMUST00000189734 Ppp1r21-004 88530216-88543436 retained_intron
  ENSMUST00000190136 Ppp1r21-007 88575194-88579180 retained_intron
  ENSMUST00000191340 Ppp1r21-005 88562117-88565790 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000038551ENSMUST00000185400ENSMUST00000188064
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000038551 6.710±0.63 3.780±1.57 7.014±0.57 16.168±6.64 4.445±1.89 3.520±1.82 2.483±0.03 9.796±3.51 4.917±0.95 4.644±1.95 1.530±0.28 7.786±3.39 8.977±1.91 1.246±0.30
ENSMUST00000185400 6.097±1.75 4.788±1.04 4.494±0.68 11.765±0.51 6.781±1.07 7.385±1.08 3.402±0.87 14.419±1.41 4.415±0.91 12.276±1.81 N/A 9.006±2.28 5.545±1.27 2.444±0.96
ENSMUST00000188064 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 47.207±0.00 27.171±0.00 9.658±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000008 CIL_000008_0002 CGP 17:88440711-88588367
CIL_0007IT CIL_0007IT_0002 CGP 17:88530118-88662586

Gene Ontology
GO IDEvidence TypeGO Description
GO:0008150 ND biological_process
GO:0016020 IEA membrane
GO:0019902 ISS phosphatase binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000027853 ppp1r21 protein phosphatase 1, regulatory subunit 21 protein_coding Danio_rerio
ENSG00000162869 PPP1R21 protein phosphatase 1, regulatory subunit 21 protein_coding Homo_sapiens

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