C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: protein phosphatase 1, regulatory subunit 21
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000162869 PPP1R21 9606 + 2:48440598-48515391 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000281394 PPP1R21-001 48440769-48515386 protein_coding
  ENST00000294952 PPP1R21-009 48440797-48515386 protein_coding
  ENST00000416913 PPP1R21-008 48440769-48515385 nonsense_mediated_decay
  ENST00000421486 PPP1R21-011 48441129-48454728 protein_coding
  ENST00000431614 PPP1R21-007 48440598-48511468 nonsense_mediated_decay
  ENST00000449090 PPP1R21-201 48440769-48515391 protein_coding
  ENST00000455978 PPP1R21-013 48471311-48498501 nonsense_mediated_decay
  ENST00000460299 PPP1R21-005 48464966-48471450 retained_intron
  ENST00000476199 PPP1R21-006 48507211-48515386 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000281394ENST00000294952ENST00000416913ENST00000431614ENST00000449090ENST00000455978ENST00000476199
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000281394 N/A N/A N/A N/A N/A 0.923±0.00 N/A N/A 1.045±0.00 N/A N/A 2.214±0.00 N/A N/A
ENST00000294952 4.107±0.00 7.534±0.00 1.691±0.00 6.416±4.06 3.167±1.02 2.913±0.75 1.709±1.43 3.776±2.94 1.444±0.36 1.234±0.02 2.399±0.00 6.013±0.92 5.485±2.69 7.168±0.36
ENST00000416913 N/A N/A N/A N/A 1.402±0.00 N/A 0.415±0.00 3.375±0.00 N/A 2.188±0.00 N/A 2.014±0.00 1.505±0.41 N/A
ENST00000431614 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.270±0.00 N/A N/A
ENST00000449090 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.097±0.00 N/A N/A N/A
ENST00000455978 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.828±0.00 N/A N/A N/A
ENST00000476199 N/A N/A 3.400±0.00 N/A N/A 1.864±0.00 N/A 6.555±0.00 1.118±0.00 3.661±0.00 1.517±0.00 4.943±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000008 CIL_000008_0001 CGP 2:48314637-48515391
CIL_0007IT CIL_0007IT_0001 CGP 2:48440598-48598513

Gene Ontology
GO IDEvidence TypeGO Description
GO:0016020 IDA membrane
GO:0019902 IDA phosphatase binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000027853 ppp1r21 protein phosphatase 1, regulatory subunit 21 protein_coding Danio_rerio
ENSMUSG00000034709 Ppp1r21 protein phosphatase 1, regulatory subunit 21 protein_coding Mus_musculus

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