C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein phosphatase 1, regulatory subunit 21
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000185400 Ppp1r21-003 ENSMUSG00000034709 10090 + 17:88578730-88588365 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000185400
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000185400 6.097±1.75 4.788±1.04 4.494±0.68 11.765±0.51 6.781±1.07 7.385±1.08 3.402±0.87 14.419±1.41 4.415±0.91 12.276±1.81 9.006±2.28 5.545±1.27 2.444±0.96

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000008 CIL_000008_0002 CGP 17:88440711-88588367
CIL_0007IT CIL_0007IT_0002 CGP 17:88530118-88662586

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000281394 PPP1R21-001 protein_coding Homo_sapiens 0 355
ENST00000294952 PPP1R21-009 protein_coding Homo_sapiens 0 385
ENST00000416913 PPP1R21-008 nonsense_mediated_decay Homo_sapiens 0 385
ENST00000431614 PPP1R21-007 nonsense_mediated_decay Homo_sapiens 0 359
ENST00000449090 PPP1R21-201 protein_coding Homo_sapiens 0 355
ENST00000476199 PPP1R21-006 processed_transcript Homo_sapiens 0 357

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