C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein phosphatase 1, regulatory subunit 21
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000038551 Ppp1r21-001 ENSMUSG00000034709 10090 + 17:88530118-88588367 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000038551
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000038551 6.710±0.63 3.780±1.57 7.014±0.57 16.168±6.64 4.445±1.89 3.520±1.82 2.483±0.03 9.796±3.51 4.917±0.95 4.644±1.95 1.530±0.28 7.786±3.39 8.977±1.91 1.246±0.30

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000008 CIL_000008_0002 CGP 17:88440711-88588367
CIL_0007IT CIL_0007IT_0002 CGP 17:88530118-88662586

Gene Ontology

GO IDEvidence TypeGO Description
GO:0008150 ND biological_process
GO:0016020 IEA membrane
GO:0019902 ISS phosphatase binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000281394 PPP1R21-001 protein_coding Homo_sapiens 0 2338
ENST00000294952 PPP1R21-009 protein_coding Homo_sapiens 0 2713
ENST00000416913 PPP1R21-008 nonsense_mediated_decay Homo_sapiens 0 2479
ENST00000421486 PPP1R21-011 protein_coding Homo_sapiens 0 261
ENST00000431614 PPP1R21-007 nonsense_mediated_decay Homo_sapiens 0 2242
ENST00000449090 PPP1R21-201 protein_coding Homo_sapiens 0 2069
ENST00000455978 PPP1R21-013 nonsense_mediated_decay Homo_sapiens 0 536
ENST00000460299 PPP1R21-005 retained_intron Homo_sapiens 0 464
ENST00000476199 PPP1R21-006 processed_transcript Homo_sapiens 0 357

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