C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: MAM domain containing glycosylphosphatidylinositol anchor 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000034912 Mdga2 10090 - 12:66469568-67222549 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000037181 Mdga2-002 66469568-67222549 protein_coding
  ENSMUST00000101379 Mdga2-007 66471469-67221202 nonsense_mediated_decay
  ENSMUST00000113942 Mdga2-201 66470636-66471058 protein_coding
  ENSMUST00000177690 Mdga2-006 66689496-66825729 processed_transcript
  ENSMUST00000178724 Mdga2-003 66481622-66486838 retained_intron
  ENSMUST00000178814 Mdga2-001 66471182-67221221 protein_coding
  ENSMUST00000179025 Mdga2-005 67212530-67222381 processed_transcript
  ENSMUST00000179577 Mdga2-004 67196294-67222542 processed_transcript
  ENSMUST00000179729 Mdga2-008 66619602-66630113 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000037181ENSMUST00000101379ENSMUST00000113942ENSMUST00000177690ENSMUST00000178724ENSMUST00000178814ENSMUST00000179025ENSMUST00000179577
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000037181 N/A N/A N/A 1.130±0.00 N/A 0.102±0.00 N/A N/A 0.009±0.00 N/A N/A N/A 0.005±0.00 0.137±0.08
ENSMUST00000101379 N/A N/A 0.013±0.00 2.263±0.00 N/A N/A 0.098±0.01 0.025±0.00 N/A N/A 0.013±0.00 0.086±0.04 0.007±0.00 N/A
ENSMUST00000113942 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.098±0.00 N/A N/A N/A
ENSMUST00000177690 N/A N/A N/A N/A N/A N/A 0.431±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000178724 0.299±0.13 N/A 0.102±0.07 N/A 0.268±0.09 0.310±0.09 0.074±0.02 0.137±0.04 0.052±0.04 0.253±0.09 0.005±0.00 0.420±0.24 0.045±0.04 0.142±0.00
ENSMUST00000178814 N/A N/A N/A 1.144±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.475±0.00
ENSMUST00000179025 0.139±0.06 0.414±0.16 N/A 2.928±0.00 0.080±0.03 0.183±0.05 0.099±0.02 0.029±0.00 0.026±0.01 N/A N/A 0.103±0.05 N/A N/A
ENSMUST00000179577 N/A 0.149±0.00 0.016±0.00 N/A 0.094±0.02 0.073±0.03 0.043±0.00 0.039±0.02 0.020±0.00 0.031±0.00 0.015±0.00 0.098±0.03 0.012±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00046T CIL_00046T_0002 CGP 12:66283379-67222549
CIL_0005Q4 CIL_0005Q4_0002 CGP 12:66469568-69159186

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005886 IEA plasma membrane
GO:0007389 IMP pattern specification process
GO:0016020 IEA membrane
GO:0021522 IEA spinal cord motor neuron differentiation
GO:0031225 IEA anchored component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000024017 mamdc1 MAM domain containing 1 protein_coding Danio_rerio
ENSDARG00000086799 MDGA2 (2 of 4) MAM domain containing glycosylphosphatidylinositol anchor 2 protein_coding Danio_rerio
ENSG00000139915 MDGA2 MAM domain containing glycosylphosphatidylinositol anchor 2 protein_coding Homo_sapiens

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