C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SECIS binding protein 2-like
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000035093 Secisbp2l 10090 - 2:125736986-125782870 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000053699 Secisbp2l-001 125736986-125782870 protein_coding
  ENSMUST00000136450 Secisbp2l-003 125750378-125752264 retained_intron
  ENSMUST00000139944 Secisbp2l-002 125744775-125760314 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000053699
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000053699 9.163±1.03 11.749±1.42 6.549±1.59 10.234±4.71 6.999±1.81 8.130±2.43 2.810±0.53 8.389±0.21 3.535±1.98 20.585±1.01 2.078±0.86 7.685±3.03 8.930±3.72 2.081±0.34

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008GC CIL_0008GC_0002 VISTA 2:125191395-125793910
CIL_0004N9 CIL_0004N9_0002 CGP 2:125673095-125782870
CIL_0002PL CIL_0002PL_0002 CGP 2:125736986-125859139

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000078687 SECISBP2L SECIS binding protein 2-like protein_coding Danio_rerio
ENSG00000138593 SECISBP2L SECIS binding protein 2-like protein_coding Homo_sapiens

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