C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: phosphate cytidylyltransferase 1, choline, beta isoform
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000035246 Pcyt1b 10090 + X:93654863-93749951 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000045898 Pcyt1b-001 93675102-93749951 protein_coding
  ENSMUST00000113933 Pcyt1b-003 93654863-93749951 protein_coding
  ENSMUST00000146263 Pcyt1b-002 93731562-93734856 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000045898ENSMUST00000113933ENSMUST00000146263
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000045898 0.236±0.12 0.251±0.01 0.101±0.01 4.100±1.74 0.334±0.01 0.206±0.00 0.058±0.02 0.008±0.00 4.935±2.01 0.259±0.09 0.040±0.02 1.299±0.43 0.311±0.04 0.147±0.02
ENSMUST00000113933 0.538±0.34 0.171±0.09 N/A 3.664±0.00 0.252±0.00 0.233±0.11 0.019±0.00 0.041±0.02 0.027±0.01 0.278±0.02 0.025±0.00 0.910±0.31 0.151±0.04 0.446±0.16
ENSMUST00000146263 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.216±0.00 9.307±0.00 1.446±0.00 3.933±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008W8 CIL_0008W8_0002 VISTA X:93076664-93678616
CIL_0008NM CIL_0008NM_0002 VISTA X:93107742-93710584
CIL_0008NL CIL_0008NL_0002 VISTA X:93128674-93730367
CIL_0008NF CIL_0008NF_0002 VISTA X:93157367-93758875
CIL_0008NE CIL_0008NE_0002 VISTA X:93196691-93798662
CIL_00084H CIL_00084H_0002 VISTA X:93277817-93878339
CIL_00007Q CIL_00007Q_0003 CGP X:93654863-93832201

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001541 IMP ovarian follicle development
GO:0004105 IEA choline-phosphate cytidylyltransferase activity
GO:0005783 IEA endoplasmic reticulum
GO:0006657 IEA CDP-choline pathway
GO:0007283 IMP spermatogenesis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000044456 pcyt1bb phosphate cytidylyltransferase 1, choline, beta b protein_coding Danio_rerio
ENSDARG00000058162 pcyt1ba phosphate cytidylyltransferase 1, choline, beta a protein_coding Danio_rerio
ENSG00000102230 PCYT1B phosphate cytidylyltransferase 1, choline, beta protein_coding Homo_sapiens

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