C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: DENN/MADD domain containing 1A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000035392 Dennd1a 10090 - 2:37798991-38287390 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000102787 Dennd1a-001 37798991-38287375 protein_coding
  ENSMUST00000126889 Dennd1a-009 38021266-38166081 retained_intron
  ENSMUST00000128492 Dennd1a-006 38242917-38287214 retained_intron
  ENSMUST00000130472 Dennd1a-007 37936664-38287188 protein_coding
  ENSMUST00000136116 Dennd1a-008 38159252-38243470 retained_intron
  ENSMUST00000136460 Dennd1a-010 37801072-37852440 protein_coding
  ENSMUST00000140552 Dennd1a-002 37816916-38287390 nonsense_mediated_decay
  ENSMUST00000142813 Dennd1a-005 38126604-38287218 nonsense_mediated_decay
  ENSMUST00000143095 Dennd1a-004 38043346-38287358 nonsense_mediated_decay
  ENSMUST00000150896 Dennd1a-003 37936619-38287377 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000102787ENSMUST00000136460ENSMUST00000140552
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000102787 3.719±0.45 5.022±0.49 3.454±0.41 6.129±1.69 3.536±1.50 2.330±0.87 1.969±0.20 6.359±1.35 2.426±0.76 3.403±1.19 1.216±0.52 3.972±1.82 5.783±2.70 4.729±2.10
ENSMUST00000136460 N/A N/A N/A 11.806±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140552 N/A N/A N/A 8.584±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006WP CIL_0006WP_0002 CGP 2:37776249-38287390
CIL_0006WO CIL_0006WO_0002 CGP 2:37798991-38369733

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005886 IEA plasma membrane
GO:0006897 ISS endocytosis
GO:0015031 IEA protein transport
GO:0017112 ISS Rab guanyl-nucleotide exchange factor activity
GO:0017124 IPI SH3 domain binding
GO:0030054 IEA cell junction
GO:0030136 IDA clathrin-coated vesicle
GO:0030425 IDA dendrite
GO:0030665 IDA clathrin-coated vesicle membrane
GO:0032483 IEA regulation of Rab protein signal transduction
GO:0032851 ISS positive regulation of Rab GTPase activity
GO:0043025 IDA neuronal cell body
GO:0045202 IDA synapse
GO:0048488 IDA synaptic vesicle endocytosis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000014592 dennd1a DENN/MADD domain containing 1A protein_coding Danio_rerio
ENSG00000119522 DENND1A DENN/MADD domain containing 1A protein_coding Homo_sapiens

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