C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DENN/MADD domain containing 1A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000136460 Dennd1a-010 ENSMUSG00000035392 10090 - 2:37801072-37852440 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainENSMUST00000136460
Transcript ID Brain
ENSMUST00000136460 11.806±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006WP CIL_0006WP_0002 CGP 2:37776249-38287390
CIL_0006WO CIL_0006WO_0002 CGP 2:37798991-38369733

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0017124 IPI SH3 domain binding
GO:0030136 IDA clathrin-coated vesicle
GO:0030425 IDA dendrite
GO:0030665 IDA clathrin-coated vesicle membrane
GO:0043025 IDA neuronal cell body
GO:0045202 IDA synapse
GO:0048488 IDA synaptic vesicle endocytosis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000373618 DENND1A-003 protein_coding Homo_sapiens 4e-36 158
ENST00000373620 DENND1A-004 protein_coding Homo_sapiens 0 243
ENST00000373624 DENND1A-002 protein_coding Homo_sapiens 0 342
ENST00000394215 DENND1A-201 protein_coding Homo_sapiens 0 243
ENST00000394219 DENND1A-202 protein_coding Homo_sapiens 0 342
ENST00000473039 DENND1A-007 processed_transcript Homo_sapiens 0 750
ENST00000479305 DENND1A-010 processed_transcript Homo_sapiens 4e-36 156
ENST00000491650 DENND1A-001 processed_transcript Homo_sapiens 5e-40 169
ENST00000497135 DENND1A-009 processed_transcript Homo_sapiens 6e-36 156

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