C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: DENN/MADD domain containing 1A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000119522 DENND1A 9606 - 9:123379654-123930152 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000373618 DENND1A-003 123413271-123930152 protein_coding
  ENST00000373620 DENND1A-004 123400099-123930126 protein_coding
  ENST00000373624 DENND1A-002 123379654-123930107 protein_coding
  ENST00000394215 DENND1A-201 123401810-123676791 protein_coding
  ENST00000394219 DENND1A-202 123379654-123676791 protein_coding
  ENST00000462245 DENND1A-011 123439727-123457378 processed_transcript
  ENST00000473039 DENND1A-007 123379654-123798515 processed_transcript
  ENST00000474676 DENND1A-005 123569545-123757759 processed_transcript
  ENST00000475421 DENND1A-008 123401548-123403573 processed_transcript
  ENST00000475615 DENND1A-006 123630396-123652291 processed_transcript
  ENST00000479305 DENND1A-010 123437647-123462023 processed_transcript
  ENST00000491650 DENND1A-001 123403475-123609453 processed_transcript
  ENST00000497135 DENND1A-009 123411293-123583217 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000373620ENST00000373624ENST00000394215ENST00000394219ENST00000473039ENST00000474676ENST00000479305ENST00000497135
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000373620 N/A N/A N/A N/A 0.586±0.00 0.777±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000373624 5.402±0.00 3.593±0.00 2.042±0.00 2.921±1.21 1.856±1.04 1.524±0.67 1.256±1.10 N/A 0.705±0.00 2.651±0.00 N/A 7.956±4.67 7.304±1.12 3.791±1.15
ENST00000394215 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.384±0.00 6.971±1.04 N/A
ENST00000394219 3.856±0.00 2.112±0.00 N/A N/A 1.862±0.00 3.244±0.00 0.733±0.00 1.932±1.18 2.006±0.00 N/A N/A 1.978±1.20 N/A 3.012±0.00
ENST00000473039 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.551±0.00 N/A N/A N/A
ENST00000474676 N/A N/A N/A N/A N/A N/A N/A 2.390±0.00 N/A N/A N/A N/A N/A N/A
ENST00000479305 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 10.417±0.00 N/A N/A
ENST00000497135 N/A N/A N/A N/A N/A N/A 0.575±0.00 N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006WP CIL_0006WP_0001 CGP 9:123356170-123930152
CIL_0006WO CIL_0006WO_0001 CGP 9:123379654-124033301

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005886 IEA plasma membrane
GO:0006897 IMP endocytosis
GO:0015031 IEA protein transport
GO:0017112 IDA Rab guanyl-nucleotide exchange factor activity
GO:0017124 IEA SH3 domain binding
GO:0030054 IEA cell junction
GO:0030136 IDA clathrin-coated vesicle
GO:0030425 IEA dendrite
GO:0030665 IEA clathrin-coated vesicle membrane
GO:0032483 IDA regulation of Rab protein signal transduction
GO:0032851 IDA positive regulation of Rab GTPase activity
GO:0043025 IEA neuronal cell body
GO:0045202 IEA synapse
GO:0048488 IEA synaptic vesicle endocytosis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000014592 dennd1a DENN/MADD domain containing 1A protein_coding Danio_rerio
ENSMUSG00000035392 Dennd1a DENN/MADD domain containing 1A protein_coding Mus_musculus

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