C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: eukaryotic translation initiation factor 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000035530 Eif1 10090 + 11:100319885-100322096 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000049385 Eif1-001 100319885-100322096 protein_coding
  ENSMUST00000132618 Eif1-005 100320884-100321533 processed_transcript
  ENSMUST00000139846 Eif1-003 100320518-100321349 processed_transcript
  ENSMUST00000151513 Eif1-002 100320209-100320989 protein_coding
  ENSMUST00000152521 Eif1-004 100320708-100321749 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000049385ENSMUST00000132618ENSMUST00000139846ENSMUST00000151513
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000049385 59.123±3.67 88.756±15.72 136.100±13.84 87.409±3.82 70.425±3.54 69.519±5.57 91.666±4.83 74.719±10.18 79.402±30.85 83.950±6.27 264.409±8.55 66.123±20.21 90.195±22.29 102.256±35.79
ENSMUST00000132618 N/A N/A 148.833±0.00 160.301±0.00 N/A N/A N/A N/A 147.962±63.21 N/A N/A 192.022±24.70 237.414±94.68 200.205±105.15
ENSMUST00000139846 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 86.592±0.00 253.765±53.49 147.415±0.00
ENSMUST00000151513 N/A N/A N/A N/A N/A 11.255±0.00 N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000TT CIL_0000TT_0003 CGP 11:100262882-100322096
CIL_0007BG CIL_0007BG_0002 CGP 11:100319885-100336996

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003743 IEA translation initiation factor activity
GO:0005575 ND cellular_component
GO:0006413 IEA translational initiation
GO:0009048 IMP dosage compensation by inactivation of X chromosome
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000012688 eif1b eukaryotic translation initiation factor 1B protein_coding Danio_rerio
ENSG00000173812 EIF1 eukaryotic translation initiation factor 1 protein_coding Homo_sapiens

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