C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: eukaryotic translation initiation factor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000151513 Eif1-002 ENSMUSG00000035530 10090 + 11:100320209-100320989 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonENSMUST00000151513
Transcript ID Colon
ENSMUST00000151513 11.255±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000TT CIL_0000TT_0003 CGP 11:100262882-100322096
CIL_0007BG CIL_0007BG_0002 CGP 11:100319885-100336996

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003743 IEA translation initiation factor activity
GO:0005575 ND cellular_component
GO:0006413 IEA translational initiation
GO:0009048 IMP dosage compensation by inactivation of X chromosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000310837 EIF1-003 processed_transcript Homo_sapiens 0.0000000007 69
ENST00000421436 EIF1P1-001 processed_pseudogene Homo_sapiens 0 285
ENST00000423841 EIF1P3-001 processed_pseudogene Homo_sapiens 0 327
ENST00000428233 EIF1P2-001 processed_pseudogene Homo_sapiens 0 191
ENST00000462917 EIF1-002 retained_intron Homo_sapiens 0 300
ENST00000469257 EIF1-001 protein_coding Homo_sapiens 0 364
ENST00000469308 EIF1-005 processed_transcript Homo_sapiens 0 363
ENST00000482111 EIF1-004 retained_intron Homo_sapiens 0 302
ENST00000487533 EIF1P7-001 processed_pseudogene Homo_sapiens 0 322
ENST00000585002 EIF1P5-001 unprocessed_pseudogene Homo_sapiens 2e-29 132
ENST00000586699 EIF1-009 protein_coding Homo_sapiens 1e-29 134
ENST00000591776 EIF1-010 protein_coding Homo_sapiens 0 364
ENST00000600054 EIF1P6-001 unprocessed_pseudogene Homo_sapiens 0 243

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