C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: eukaryotic translation initiation factor 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000173812 EIF1 9606 + 17:41688885-41692668 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000310837 EIF1-003 41688901-41691630 processed_transcript
  ENST00000462917 EIF1-002 41688885-41691646 retained_intron
  ENST00000469257 EIF1-001 41688893-41692668 protein_coding
  ENST00000469308 EIF1-005 41688935-41690999 processed_transcript
  ENST00000482111 EIF1-004 41688895-41691622 retained_intron
  ENST00000586699 EIF1-009 41689903-41690620 protein_coding
  ENST00000591776 EIF1-010 41688887-41691212 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000310837ENST00000462917ENST00000469257ENST00000469308ENST00000482111ENST00000591776
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000310837 160.996±0.00 152.162±0.00 9.003±0.00 101.113±87.59 99.720±85.04 134.219±120.51 77.999±68.23 169.059±0.00 31.102±18.19 164.428±150.13 248.460±177.67 219.940±135.83 38.478±0.00 160.184±0.00
ENST00000462917 N/A N/A 1.403±0.00 N/A 2.298±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000469257 N/A N/A 1.532±0.00 14.731±4.13 3.210±0.00 1.757±0.00 0.990±0.00 N/A 4.555±0.00 3.357±0.00 6.036±0.00 23.237±18.24 N/A N/A
ENST00000469308 219.585±0.00 166.884±0.00 N/A N/A 153.933±0.00 225.071±0.00 170.674±0.00 81.586±71.54 125.938±0.00 192.037±0.00 146.678±127.51 525.039±563.42 169.066±81.30 237.368±54.78
ENST00000482111 N/A N/A N/A N/A N/A 5.122±0.00 2.930±0.00 14.552±0.00 5.392±0.00 4.478±0.00 N/A 80.304±67.46 58.850±0.00 34.227±0.00
ENST00000591776 242.232±0.00 171.339±0.00 5.077±0.00 108.802±0.00 91.728±84.96 154.598±148.86 96.534±91.91 155.661±0.00 49.375±40.30 347.892±0.00 275.364±259.73 249.501±225.46 87.758±26.82 155.537±41.65

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000TT CIL_0000TT_0002 CGP 17:41619437-41692668
CIL_0007BG CIL_0007BG_0001 CGP 17:41688885-41715969

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003743 NAS:IEA translation initiation factor activity
GO:0005737 TAS cytoplasm
GO:0006413 IEA translational initiation
GO:0006446 TAS regulation of translational initiation
GO:0006950 NAS response to stress
GO:0008135 TAS translation factor activity, nucleic acid binding
GO:0009048 IEA dosage compensation by inactivation of X chromosome
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000012688 eif1b eukaryotic translation initiation factor 1B protein_coding Danio_rerio
ENSMUSG00000035530 Eif1 eukaryotic translation initiation factor 1 protein_coding Mus_musculus

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