C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: eukaryotic translation initiation factor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000049385 Eif1-001 ENSMUSG00000035530 10090 + 11:100319885-100322096 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000049385
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000049385 59.123±3.67 88.756±15.72 136.100±13.84 87.409±3.82 70.425±3.54 69.519±5.57 91.666±4.83 74.719±10.18 79.402±30.85 83.950±6.27 264.409±8.55 66.123±20.21 90.195±22.29 102.256±35.79

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000TT CIL_0000TT_0003 CGP 11:100262882-100322096
CIL_0007BG CIL_0007BG_0002 CGP 11:100319885-100336996

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003743 IEA translation initiation factor activity
GO:0005575 ND cellular_component
GO:0006413 IEA translational initiation
GO:0009048 IMP dosage compensation by inactivation of X chromosome
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000009132 eif1b-201 protein_coding Danio_rerio 0 342
ENSDART00000132874 eif1b-001 protein_coding Danio_rerio 0 342
ENSDART00000151383 eif1b-003 retained_intron Danio_rerio 0 220
ENSDART00000151582 eif1b-002 retained_intron Danio_rerio 0 220
ENST00000310837 EIF1-003 processed_transcript Homo_sapiens 0 643
ENST00000421436 EIF1P1-001 processed_pseudogene Homo_sapiens 0 436
ENST00000423841 EIF1P3-001 processed_pseudogene Homo_sapiens 0 499
ENST00000428233 EIF1P2-001 processed_pseudogene Homo_sapiens 0 313
ENST00000462917 EIF1-002 retained_intron Homo_sapiens 0 645
ENST00000469257 EIF1-001 protein_coding Homo_sapiens 0 1168
ENST00000469308 EIF1-005 processed_transcript Homo_sapiens 0 832
ENST00000482111 EIF1-004 retained_intron Homo_sapiens 0 645
ENST00000487533 EIF1P7-001 processed_pseudogene Homo_sapiens 0 472
ENST00000572664 EIF1P4-001 processed_pseudogene Homo_sapiens 0 392
ENST00000585002 EIF1P5-001 unprocessed_pseudogene Homo_sapiens 0 219
ENST00000586699 EIF1-009 protein_coding Homo_sapiens 0 228
ENST00000591776 EIF1-010 protein_coding Homo_sapiens 0 771
ENST00000600054 EIF1P6-001 unprocessed_pseudogene Homo_sapiens 0 385

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