C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: selenoprotein O
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000035757 Selo 10090 + 15:89089084-89100340 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000082439 Selo-001 89089084-89100340 protein_coding
  ENSMUST00000130700 Selo-002 89089084-89098180 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000082439ENSMUST00000130700
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000082439 7.290±0.84 20.406±12.05 4.698±0.49 4.977±1.18 6.665±1.17 14.050±6.96 3.031±0.21 11.671±1.77 13.401±7.71 6.165±0.67 3.145±0.25 7.742±2.42 2.505±0.58 2.772±0.84
ENSMUST00000130700 5.468±1.56 21.675±0.00 3.703±0.22 6.692±1.28 5.452±1.00 11.669±4.69 2.701±0.48 4.263±0.61 6.228±3.52 6.641±1.57 1.440±0.12 9.498±3.25 1.777±0.10 1.327±0.10

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000098 CIL_000098_0002 CGP 15:89075124-89100340
CIL_000097 CIL_000097_0002 CGP 15:89089084-89123087

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000014395 si:dkey-14d8.2 si:dkey-14d8.2 protein_coding Danio_rerio
ENSDARG00000041951 selo selenoprotein O protein_coding Danio_rerio
ENSG00000073169 SELO selenoprotein O protein_coding Homo_sapiens

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