C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000098_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000170638-ENSG00000073169 CGP 9606 22:50185915-50217616
GeneTranscriptPositionBiotype
ENSG00000073169 (SELO)
selenoprotein O 		ENST00000380903 (SELO-001) 50200979-50217616 protein_coding
ENST00000492092 (SELO-002) 50206442-50217616 processed_transcript
ENST00000611222 (SELO-201) 50200979-50217615 protein_coding
ENSG00000170638 (TRABD)
TraB domain containing 		ENST00000303434 (TRABD-001) 50185917-50199598 protein_coding
ENST00000380909 (TRABD-003) 50185915-50199564 protein_coding
ENST00000395827 (TRABD-004) 50190598-50199475 protein_coding
ENST00000395829 (TRABD-005) 50193014-50199569 protein_coding
ENST00000463233 (TRABD-002) 50185918-50199595 retained_intron
ENST00000472677 (TRABD-006) 50196893-50198711 retained_intron
ENSG00000272836 (RP3-402G11.27)
 ENST00000610050 (RP3-402G11.27-001) 50205585-50206062 antisense
ENSG00000273137 (RP3-402G11.28)
 ENST00000608016 (RP3-402G11.28-001) 50208461-50209542 antisense
ENSG00000273188 (RP3-402G11.25)
 ENST00000607943 (RP3-402G11.25-001) 50191724-50192402 antisense
ENSG00000273253 (RP3-402G11.26)
 ENST00000608025 (RP3-402G11.26-001) 50199090-50200837 lincRNA
CIL_000098_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000015363-ENSMUSG00000035757 CGP 10090 15:89075124-89100340
GeneTranscriptPositionBiotype
ENSMUSG00000015363 (Trabd)
TraB domain containing 		ENSMUST00000081702 (Trabd-001) 89076013-89087077 protein_coding
ENSMUST00000163696 (Trabd-007) 89084709-89085624 retained_intron
ENSMUST00000165690 (Trabd-004) 89076124-89086133 protein_coding
ENSMUST00000168863 (Trabd-006) 89075124-89085309 protein_coding
ENSMUST00000169870 (Trabd-002) 89076072-89087071 nonsense_mediated_decay
ENSMUST00000169891 (Trabd-003) 89076094-89086130 protein_coding
ENSMUST00000170754 (Trabd-005) 89082529-89087071 retained_intron
ENSMUSG00000035757 (Selo)
selenoprotein O 		ENSMUST00000082439 (Selo-001) 89089084-89100340 protein_coding
ENSMUST00000130700 (Selo-002) 89089084-89098180 nonsense_mediated_decay
ENSMUSG00000051786 (Tubgcp6)
tubulin, gamma complex associated protein 6 		ENSMUST00000041656 (Tubgcp6-003) 89100410-89122886 protein_coding
ENSMUST00000109353 (Tubgcp6-001) 89098357-89123087 protein_coding
ENSMUST00000163290 (Tubgcp6-005) 89100410-89102603 nonsense_mediated_decay
ENSMUST00000164717 (Tubgcp6-006) 89099098-89101098 retained_intron
ENSMUST00000166480 (Tubgcp6-011) 89100717-89102014 nonsense_mediated_decay
ENSMUST00000166994 (Tubgcp6-010) 89100434-89101543 retained_intron
ENSMUST00000168256 (Tubgcp6-007) 89101012-89102180 retained_intron
ENSMUST00000169069 (Tubgcp6-004) 89104216-89107429 nonsense_mediated_decay
ENSMUST00000169208 (Tubgcp6-009) 89100693-89101279 retained_intron
ENSMUST00000170877 (Tubgcp6-008) 89101476-89102372 nonsense_mediated_decay

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000098_0001ENSG00000073169ENST00000380903ENST00000492092ENST00000611222ENSG00000170638ENST00000303434ENST00000380909ENST00000395827ENST00000395829ENST00000463233ENST00000472677ENSG00000272836ENST00000610050ENSG00000273137ENST00000608016ENSG00000273188ENST00000607943ENSG00000273253ENST00000608025CIL_000098_0002ENSMUSG00000015363ENSMUST00000081702ENSMUST00000163696ENSMUST00000165690ENSMUST00000168863ENSMUST00000169870ENSMUST00000169891ENSMUST00000170754ENSMUSG00000035757ENSMUST00000082439ENSMUST00000130700ENSMUSG00000051786ENSMUST00000041656ENSMUST00000109353ENSMUST00000163290ENSMUST00000164717ENSMUST00000166480ENSMUST00000166994ENSMUST00000168256ENSMUST00000169069ENSMUST00000169208ENSMUST00000170877
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000098_0001ENSG00000073169ENST00000380903ENST00000492092ENST00000611222ENSG00000170638ENST00000303434ENST00000380909ENST00000395827ENST00000395829ENST00000463233ENST00000472677ENSG00000272836ENST00000610050ENSG00000273137ENST00000608016ENSG00000273188ENST00000607943ENSG00000273253ENST00000608025CIL_000098_0002ENSMUSG00000015363ENSMUST00000081702ENSMUST00000165690ENSMUST00000168863ENSMUST00000169870ENSMUST00000169891ENSMUST00000170754ENSMUSG00000035757ENSMUST00000082439ENSMUST00000130700ENSMUSG00000051786ENSMUST00000041656ENSMUST00000109353ENSMUST00000164717
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000073169 ENST00000380903 1.639±0.00 N/A N/A 0.270±0.00 2.042±0.00 1.127±0.51 1.362±1.28 N/A 27.092±0.00 5.514±0.00 5.998±0.00 2.144±0.48 1.695±0.61 3.004±1.37
ENST00000492092 N/A 5.606±0.00 N/A N/A N/A N/A N/A 4.034±0.00 6.523±0.00 2.475±0.00 0.753±0.00 5.464±0.88 3.243±0.72 8.434±0.00
ENST00000611222 1.631±0.00 N/A N/A 1.021±0.00 1.133±0.87 1.069±0.45 1.460±1.12 9.962±0.00 8.338±0.00 5.340±0.00 4.120±1.73 5.514±2.92 1.738±0.62 4.429±0.13
ENSG00000170638 ENST00000303434 2.088±0.00 N/A N/A N/A N/A 1.557±0.00 0.076±0.00 N/A N/A N/A 2.132±0.00 N/A 3.268±0.00 4.878±0.00
ENST00000380909 2.680±0.00 5.636±0.00 N/A N/A N/A N/A 1.859±0.00 N/A 1.282±0.00 3.267±0.00 N/A 15.655±11.89 5.639±2.42 2.516±0.00
ENST00000395827 N/A N/A 0.632±0.00 N/A 1.508±0.33 2.375±0.00 N/A 3.197±0.00 1.558±0.00 4.066±0.00 1.609±0.00 3.536±0.00 4.193±2.84 N/A
ENST00000395829 N/A 8.558±0.00 0.132±0.00 2.007±0.00 4.640±0.00 2.564±2.12 1.330±0.00 8.503±0.00 0.902±0.39 7.964±0.00 1.242±0.00 25.448±26.09 5.788±2.78 10.248±5.25
ENST00000463233 N/A 6.391±0.00 N/A N/A 2.651±0.00 N/A N/A 4.730±0.00 2.490±0.00 4.174±0.00 0.200±0.00 1.944±0.00 N/A 3.433±1.61
ENST00000472677 N/A N/A N/A 1.222±0.00 N/A N/A N/A N/A 0.234±0.00 N/A N/A 5.556±0.00 N/A N/A
ENSG00000272836 ENST00000610050 0.425±0.00 N/A N/A N/A N/A 0.160±0.00 0.259±0.00 N/A 0.215±0.00 0.402±0.00 N/A 1.351±0.26 0.389±0.03 N/A
ENSG00000273137 ENST00000608016 5.350±0.00 11.299±0.00 N/A N/A 5.247±0.00 4.451±0.00 3.599±0.00 N/A N/A 5.787±0.00 4.423±1.38 5.060±0.00 N/A 7.437±0.00
ENSG00000273188 ENST00000607943 0.545±0.00 1.656±0.00 N/A 1.246±0.50 0.838±0.02 0.354±0.22 0.065±0.00 0.537±0.12 0.157±0.00 0.710±0.15 0.302±0.00 0.678±0.32 0.323±0.11 0.402±0.01
ENSG00000273253 ENST00000608025 N/A 13.348±0.00 N/A 1.793±1.22 6.006±0.00 3.993±0.00 2.837±0.00 10.070±0.00 3.852±0.00 12.240±0.00 4.565±0.00 12.432±0.00 4.410±0.00 6.337±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000015363 ENSMUST00000081702 11.934±1.67 9.549±2.32 11.682±1.32 8.119±0.69 13.504±1.43 20.054±3.39 15.456±1.27 17.057±3.47 15.648±7.71 14.583±3.11 11.267±1.14 12.117±3.90 9.207±3.40 4.513±1.06
ENSMUST00000163696 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000165690 3.113±0.00 5.500±0.00 N/A N/A N/A N/A N/A N/A 5.968±1.56 4.671±0.89 3.443±0.50 3.059±0.00 5.331±0.33 2.418±0.20
ENSMUST00000168863 N/A N/A N/A 12.736±0.00 N/A N/A N/A N/A N/A N/A N/A 35.908±0.00 32.261±0.57 38.942±0.00
ENSMUST00000169870 3.499±0.95 12.137±1.90 3.767±0.10 2.349±0.41 10.850±3.60 17.098±4.42 N/A 7.455±1.46 5.050±3.09 6.861±0.92 3.020±0.00 10.322±3.45 7.199±3.27 2.208±0.18
ENSMUST00000169891 N/A N/A N/A 7.170±0.00 N/A N/A N/A N/A N/A N/A N/A 13.535±0.00 17.691±4.65 3.697±1.22
ENSMUST00000170754 1.468±0.21 N/A N/A 1.019±0.06 2.181±0.31 2.868±0.00 N/A N/A N/A 1.708±0.04 N/A 2.137±0.58 N/A N/A
ENSMUSG00000035757 ENSMUST00000082439 7.290±0.84 20.406±12.05 4.698±0.49 4.977±1.18 6.665±1.17 14.050±6.96 3.031±0.21 11.671±1.77 13.401±7.71 6.165±0.67 3.145±0.25 7.742±2.42 2.505±0.58 2.772±0.84
ENSMUST00000130700 5.468±1.56 21.675±0.00 3.703±0.22 6.692±1.28 5.452±1.00 11.669±4.69 2.701±0.48 4.263±0.61 6.228±3.52 6.641±1.57 1.440±0.12 9.498±3.25 1.777±0.10 1.327±0.10
ENSMUSG00000051786 ENSMUST00000041656 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.537±0.00 N/A
ENSMUST00000109353 3.463±0.66 6.221±0.99 3.023±1.75 2.942±1.29 3.597±0.94 3.708±1.05 1.928±0.08 2.199±0.53 2.229±0.69 3.808±0.42 2.294±0.37 4.597±1.07 2.296±1.28 1.440±0.03
ENSMUST00000163290 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000164717 7.529±1.34 17.978±0.87 3.933±0.50 8.734±2.53 10.654±1.57 9.657±1.38 3.696±1.05 11.048±0.91 11.535±6.07 7.693±0.57 2.716±0.43 11.215±3.43 3.981±1.15 2.578±0.34
ENSMUST00000166480 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000166994 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000168256 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000169069 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000169208 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000170877 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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