C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000097_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000073169-ENSG00000128159 CGP 9606 22:50200979-50244992
GeneTranscriptPositionBiotype
ENSG00000073169 (SELO)
selenoprotein O 		ENST00000380903 (SELO-001) 50200979-50217616 protein_coding
ENST00000492092 (SELO-002) 50206442-50217616 processed_transcript
ENST00000611222 (SELO-201) 50200979-50217615 protein_coding
ENSG00000128159 (TUBGCP6)
tubulin, gamma complex associated protein 6 		ENST00000248846 (TUBGCP6-001) 50217689-50244564 protein_coding
ENST00000425018 (TUBGCP6-006) 50217694-50220416 protein_coding
ENST00000434349 (TUBGCP6-007) 50226735-50240360 protein_coding
ENST00000439308 (TUBGCP6-201) 50217689-50244971 protein_coding
ENST00000473946 (TUBGCP6-004) 50222987-50226191 processed_transcript
ENST00000489511 (TUBGCP6-005) 50221760-50224592 processed_transcript
ENST00000491449 (TUBGCP6-003) 50217694-50226189 processed_transcript
ENST00000498611 (TUBGCP6-002) 50217689-50244992 retained_intron
ENSG00000272836 (RP3-402G11.27)
 ENST00000610050 (RP3-402G11.27-001) 50205585-50206062 antisense
ENSG00000273137 (RP3-402G11.28)
 ENST00000608016 (RP3-402G11.28-001) 50208461-50209542 antisense
CIL_000097_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000035757-ENSMUSG00000051786 CGP 10090 15:89089084-89123087
GeneTranscriptPositionBiotype
ENSMUSG00000035757 (Selo)
selenoprotein O 		ENSMUST00000082439 (Selo-001) 89089084-89100340 protein_coding
ENSMUST00000130700 (Selo-002) 89089084-89098180 nonsense_mediated_decay
ENSMUSG00000051786 (Tubgcp6)
tubulin, gamma complex associated protein 6 		ENSMUST00000041656 (Tubgcp6-003) 89100410-89122886 protein_coding
ENSMUST00000109353 (Tubgcp6-001) 89098357-89123087 protein_coding
ENSMUST00000163290 (Tubgcp6-005) 89100410-89102603 nonsense_mediated_decay
ENSMUST00000164717 (Tubgcp6-006) 89099098-89101098 retained_intron
ENSMUST00000166480 (Tubgcp6-011) 89100717-89102014 nonsense_mediated_decay
ENSMUST00000166994 (Tubgcp6-010) 89100434-89101543 retained_intron
ENSMUST00000168256 (Tubgcp6-007) 89101012-89102180 retained_intron
ENSMUST00000169069 (Tubgcp6-004) 89104216-89107429 nonsense_mediated_decay
ENSMUST00000169208 (Tubgcp6-009) 89100693-89101279 retained_intron
ENSMUST00000170877 (Tubgcp6-008) 89101476-89102372 nonsense_mediated_decay

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000097_0001ENSG00000073169ENST00000380903ENST00000492092ENST00000611222ENSG00000128159ENST00000248846ENST00000425018ENST00000434349ENST00000439308ENST00000473946ENST00000489511ENST00000491449ENST00000498611ENSG00000272836ENST00000610050ENSG00000273137ENST00000608016CIL_000097_0002ENSMUSG00000035757ENSMUST00000082439ENSMUST00000130700ENSMUSG00000051786ENSMUST00000041656ENSMUST00000109353ENSMUST00000163290ENSMUST00000164717ENSMUST00000166480ENSMUST00000166994ENSMUST00000168256ENSMUST00000169069ENSMUST00000169208ENSMUST00000170877
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000097_0001ENSG00000073169ENST00000380903ENST00000492092ENST00000611222ENSG00000128159ENST00000248846ENST00000425018ENST00000439308ENST00000473946ENST00000491449ENST00000498611ENSG00000272836ENST00000610050ENSG00000273137ENST00000608016CIL_000097_0002ENSMUSG00000035757ENSMUST00000082439ENSMUST00000130700ENSMUSG00000051786ENSMUST00000041656ENSMUST00000109353ENSMUST00000164717
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000073169 ENST00000380903 1.639±0.00 N/A N/A 0.270±0.00 2.042±0.00 1.127±0.51 1.362±1.28 N/A 27.092±0.00 5.514±0.00 5.998±0.00 2.144±0.48 1.695±0.61 3.004±1.37
ENST00000492092 N/A 5.606±0.00 N/A N/A N/A N/A N/A 4.034±0.00 6.523±0.00 2.475±0.00 0.753±0.00 5.464±0.88 3.243±0.72 8.434±0.00
ENST00000611222 1.631±0.00 N/A N/A 1.021±0.00 1.133±0.87 1.069±0.45 1.460±1.12 9.962±0.00 8.338±0.00 5.340±0.00 4.120±1.73 5.514±2.92 1.738±0.62 4.429±0.13
ENSG00000128159 ENST00000248846 2.191±0.00 N/A N/A 1.348±0.29 0.922±0.24 0.833±0.00 0.734±0.32 N/A N/A 1.592±0.48 0.865±0.00 3.667±0.00 0.825±0.22 1.269±0.00
ENST00000425018 N/A N/A N/A N/A N/A 2.514±0.00 N/A 1.289±0.00 1.343±0.00 5.747±0.00 2.577±0.15 N/A N/A N/A
ENST00000434349 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000439308 0.798±0.00 N/A N/A N/A N/A N/A 0.927±0.00 N/A 0.690±0.00 N/A 1.237±0.00 3.861±0.20 0.908±0.20 4.351±3.09
ENST00000473946 N/A N/A 1.363±0.00 0.825±0.00 N/A N/A 1.156±0.00 N/A 1.089±0.00 N/A N/A 8.235±0.00 3.626±0.00 16.584±0.00
ENST00000489511 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491449 1.377±0.00 5.841±0.00 N/A 2.955±0.00 3.485±0.00 1.310±0.72 N/A 2.682±2.21 0.988±0.00 2.439±0.00 1.248±0.00 8.223±1.41 2.030±0.24 5.579±3.06
ENST00000498611 0.893±0.00 1.642±0.00 N/A 0.509±0.00 0.982±0.00 1.072±0.00 0.555±0.34 N/A 0.674±0.00 0.533±0.00 N/A 1.833±0.00 N/A 1.291±0.00
ENSG00000272836 ENST00000610050 0.425±0.00 N/A N/A N/A N/A 0.160±0.00 0.259±0.00 N/A 0.215±0.00 0.402±0.00 N/A 1.351±0.26 0.389±0.03 N/A
ENSG00000273137 ENST00000608016 5.350±0.00 11.299±0.00 N/A N/A 5.247±0.00 4.451±0.00 3.599±0.00 N/A N/A 5.787±0.00 4.423±1.38 5.060±0.00 N/A 7.437±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000035757 ENSMUST00000082439 7.290±0.84 20.406±12.05 4.698±0.49 4.977±1.18 6.665±1.17 14.050±6.96 3.031±0.21 11.671±1.77 13.401±7.71 6.165±0.67 3.145±0.25 7.742±2.42 2.505±0.58 2.772±0.84
ENSMUST00000130700 5.468±1.56 21.675±0.00 3.703±0.22 6.692±1.28 5.452±1.00 11.669±4.69 2.701±0.48 4.263±0.61 6.228±3.52 6.641±1.57 1.440±0.12 9.498±3.25 1.777±0.10 1.327±0.10
ENSMUSG00000051786 ENSMUST00000041656 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.537±0.00 N/A
ENSMUST00000109353 3.463±0.66 6.221±0.99 3.023±1.75 2.942±1.29 3.597±0.94 3.708±1.05 1.928±0.08 2.199±0.53 2.229±0.69 3.808±0.42 2.294±0.37 4.597±1.07 2.296±1.28 1.440±0.03
ENSMUST00000163290 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000164717 7.529±1.34 17.978±0.87 3.933±0.50 8.734±2.53 10.654±1.57 9.657±1.38 3.696±1.05 11.048±0.91 11.535±6.07 7.693±0.57 2.716±0.43 11.215±3.43 3.981±1.15 2.578±0.34
ENSMUST00000166480 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000166994 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000168256 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000169069 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000169208 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000170877 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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