C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: selenoprotein O
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000082439 Selo-001 ENSMUSG00000035757 10090 + 15:89089084-89100340 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000082439
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000082439 7.290±0.84 20.406±12.05 4.698±0.49 4.977±1.18 6.665±1.17 14.050±6.96 3.031±0.21 11.671±1.77 13.401±7.71 6.165±0.67 3.145±0.25 7.742±2.42 2.505±0.58 2.772±0.84

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000098 CIL_000098_0002 CGP 15:89075124-89100340
CIL_000097 CIL_000097_0002 CGP 15:89089084-89123087

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000380903 SELO-001 protein_coding Homo_sapiens 0 1548
ENST00000492092 SELO-002 processed_transcript Homo_sapiens 0 804
ENST00000611222 SELO-201 protein_coding Homo_sapiens 0 1530

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