C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: selenoprotein O
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000130700 Selo-002 ENSMUSG00000035757 10090 + 15:89089084-89098180 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000130700
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000130700 5.468±1.56 21.675±0.00 3.703±0.22 6.692±1.28 5.452±1.00 11.669±4.69 2.701±0.48 4.263±0.61 6.228±3.52 6.641±1.57 1.440±0.12 9.498±3.25 1.777±0.10 1.327±0.10

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000098 CIL_000098_0002 CGP 15:89075124-89100340
CIL_000097 CIL_000097_0002 CGP 15:89089084-89123087

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000380903 SELO-001 protein_coding Homo_sapiens 0 669
ENST00000492092 SELO-002 processed_transcript Homo_sapiens 0 479
ENST00000611222 SELO-201 protein_coding Homo_sapiens 0 669

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