C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: single-strand selective monofunctional uracil DNA glycosylase
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000036061 Smug1 10090 - 15:103153307-103158002 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000064067 Smug1-201 103153307-103158002 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000064067
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000064067 0.671±0.00 1.710±0.54 0.687±0.00 2.525±1.74 2.278±1.70 1.507±0.95 0.943±0.03 0.901±0.24 1.416±0.00 0.557±0.00 3.415±2.10 3.087±0.80 0.619±0.39

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007SU CIL_0007SU_0002 VISTA 15:102699781-103302958
CIL_00084M CIL_00084M_0002 VISTA 15:102713812-103314964
CIL_00003L CIL_00003L_0002 CGP 15:103153307-103239816

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000702 ISA oxidized base lesion DNA N-glycosylase activity
GO:0000703 IEA oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity
GO:0000737 IEA DNA catabolic process, endonucleolytic
GO:0003697 ISA single-stranded DNA binding
GO:0004844 ISA uracil DNA N-glycosylase activity
GO:0005515 IEA protein binding
GO:0005730 ISS nucleolus
GO:0006281 ISA DNA repair
GO:0006284 ISS base-excision repair
GO:0017065 ISS single-strand selective uracil DNA N-glycosylase activity
GO:0019104 ISS DNA N-glycosylase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000063611 SMUG1 single-strand-selective monofunctional uracil-DNA glycosylase 1 protein_coding Danio_rerio
ENSG00000123415 SMUG1 single-strand-selective monofunctional uracil-DNA glycosylase 1 protein_coding Homo_sapiens

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