C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SLAIN motif family, member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000144843 Slain2-001 ENSMUSG00000036087 10090 + 5:72914304-72978829 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000144843
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000144843 6.513±2.41 15.969±2.50 4.181±0.12 6.280±3.75 7.842±3.70 14.315±1.10 9.876±1.01 8.106±1.49 4.204±1.07 14.462±3.33 5.176±1.11 12.914±4.95 4.196±1.54 41.139±15.36

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001MX CIL_0001MX_0002 CGP 5:72755718-72978829

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0007020 ISS microtubule nucleation
GO:0015630 ISS microtubule cytoskeleton
GO:0031113 IMP regulation of microtubule polymerization
GO:0031116 ISS positive regulation of microtubule polymerization
GO:0031122 IMP cytoplasmic microtubule organization
GO:0035371 ISS microtubule plus-end

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000264313 SLAIN2-001 protein_coding Homo_sapiens 0 3160
ENST00000505131 SLAIN2-011 nonsense_mediated_decay Homo_sapiens 1e-30 137
ENST00000506375 SLAIN2-013 processed_transcript Homo_sapiens 0 505
ENST00000510595 SLAIN2-012 protein_coding Homo_sapiens 0 409
ENST00000512093 SLAIN2-009 protein_coding Homo_sapiens 0 1286

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