C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SLAIN motif family, member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000145939 Slain2-003 ENSMUSG00000036087 10090 + 5:72948499-72974702 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastHeartKidneyLiverPlacentaTestisENSMUST00000145939
Transcript ID Breast Heart Kidney Liver Placenta Testis
ENSMUST00000145939 4.503±0.55 9.112±0.60 7.215±0.00 2.870±0.00 8.421±1.88 39.239±8.39

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001MX CIL_0001MX_0002 CGP 5:72755718-72978829

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000264313 SLAIN2-001 protein_coding Homo_sapiens 0 1122
ENST00000505131 SLAIN2-011 nonsense_mediated_decay Homo_sapiens 1e-30 137
ENST00000506375 SLAIN2-013 processed_transcript Homo_sapiens 0 278
ENST00000510595 SLAIN2-012 protein_coding Homo_sapiens 0 490
ENST00000512093 SLAIN2-009 protein_coding Homo_sapiens 0 1456
ENST00000546397 RP11-175P13.3-003 processed_transcript Homo_sapiens 4e-24 115
ENST00000548404 RP11-175P13.3-002 processed_transcript Homo_sapiens 7e-24 115
ENST00000550096 RP11-175P13.3-004 processed_transcript Homo_sapiens 6e-24 115

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