C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transient receptor potential cation channel, subfamily M, member 8
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000036251 Trpm8 10090 + 1:88277661-88389293 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000040210 Trpm8-002 88306759-88389293 protein_coding
  ENSMUST00000113114 Trpm8-001 88303283-88388851 protein_coding
  ENSMUST00000148138 Trpm8-003 88277661-88308073 processed_transcript
  ENSMUST00000171176 Trpm8-201 88318913-88388851 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverOvaryPlacentaTestisENSMUST00000040210ENSMUST00000171176
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Ovary Placenta Testis
ENSMUST00000040210 N/A 0.028±0.00 N/A N/A N/A N/A N/A N/A 0.002±0.00 0.354±0.06
ENSMUST00000171176 0.009±0.00 0.026±0.02 0.041±0.01 0.016±0.00 0.015±0.00 0.014±0.00 0.014±0.01 0.007±0.00 0.009±0.00 2.425±0.27

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007H4 CIL_0007H4_0002 CGP 1:88262471-88389293
CIL_0003R4 CIL_0003R4_0002 CGP 1:88277661-88426438

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005216 IDA ion channel activity
GO:0005262 IDA calcium channel activity
GO:0006816 IDA calcium ion transport
GO:0006874 IDA cellular calcium ion homeostasis
GO:0009266 IDA response to temperature stimulus
GO:0009409 IDA response to cold
GO:0009897 IDA external side of plasma membrane
GO:0016020 IDA membrane
GO:0016021 ISS integral component of membrane
GO:0016048 IEA detection of temperature stimulus
GO:0034220 IDA ion transmembrane transport
GO:0042803 IPI protein homodimerization activity
GO:0050955 IDA thermoception
GO:0051289 IDA protein homotetramerization
GO:0070207 IDA protein homotrimerization
GO:0070588 IDA calcium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000144481 TRPM8 transient receptor potential cation channel, subfamily M, member 8 protein_coding Homo_sapiens

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