C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ring finger protein 13
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000036503 Rnf13 10090 + 3:57736066-57835233 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000041826 Rnf13-201 57736066-57835233 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000041826
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000041826 29.144±3.70 51.256±14.43 30.772±3.26 12.906±3.17 21.382±3.78 14.681±3.53 17.952±3.96 46.574±8.63 30.076±18.30 28.185±1.09 8.164±2.41 26.243±8.49 12.621±4.83 5.358±2.16

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002R6 CIL_0002R6_0002 CGP 3:57666485-57835233
CIL_0002R5 CIL_0002R5_0002 CGP 3:57736066-57847564

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004842 IDA ubiquitin-protein transferase activity
GO:0005634 IEA nucleus
GO:0005765 IDA lysosomal membrane
GO:0008270 IEA zinc ion binding
GO:0016021 IEA integral component of membrane
GO:0016874 IEA ligase activity
GO:0031902 IDA late endosome membrane
GO:0051865 IDA protein autoubiquitination

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000082996 RNF13 ring finger protein 13 protein_coding Homo_sapiens

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