C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: PAP associated domain containing 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000036779 Papd5 10090 + 8:88199213-88259722 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000066748 Papd5-201 88199213-88259716 protein_coding
  ENSMUST00000118952 Papd5-002 88199214-88259722 protein_coding
  ENSMUST00000119033 Papd5-001 88199213-88259722 protein_coding
  ENSMUST00000125043 Papd5-003 88245285-88249211 retained_intron
  ENSMUST00000154115 Papd5-004 88251972-88257411 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000066748ENSMUST00000118952ENSMUST00000119033ENSMUST00000154115
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000066748 1.955±0.11 5.800±3.98 N/A 1.999±0.66 4.134±1.97 5.165±1.80 1.220±0.24 4.330±0.95 2.107±0.54 4.316±0.40 N/A 6.657±3.07 2.631±0.00 N/A
ENSMUST00000118952 1.534±0.28 4.984±0.00 5.572±0.00 3.949±1.53 2.503±0.93 2.255±0.32 2.356±0.78 2.411±0.30 3.927±1.64 2.392±0.00 2.747±0.71 2.471±1.06 3.700±1.61 7.807±0.51
ENSMUST00000119033 4.099±1.79 3.645±1.04 1.509±0.45 4.132±0.09 2.787±0.85 1.858±0.00 2.192±0.66 4.080±1.59 2.695±0.89 5.527±0.92 2.598±0.00 2.578±0.82 3.697±0.90 11.161±5.65
ENSMUST00000154115 3.841±0.69 N/A N/A 13.020±0.00 5.570±0.08 N/A 3.459±0.47 6.431±1.16 7.999±1.15 6.159±0.22 N/A 12.051±5.30 10.279±3.10 36.937±11.15

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003PP CIL_0003PP_0002 CGP 8:88137855-88259722
CIL_0000OK CIL_0000OK_0002 CGP 8:88199213-88329962

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003887 IEA DNA-directed DNA polymerase activity
GO:0004652 IEA polynucleotide adenylyltransferase activity
GO:0005575 ND cellular_component
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006364 IEA rRNA processing
GO:0006397 IEA mRNA processing
GO:0007067 IEA mitotic nuclear division
GO:0008152 IEA metabolic process
GO:0016779 IEA nucleotidyltransferase activity
GO:0044822 IEA poly(A) RNA binding
GO:0046872 IEA metal ion binding
GO:0071044 ISS histone mRNA catabolic process
GO:0071897 IEA DNA biosynthetic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000060071 PAPD5 PAP associated domain containing 5 protein_coding Danio_rerio
ENSG00000121274 PAPD5 PAP associated domain containing 5 protein_coding Homo_sapiens

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