C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: PAP associated domain containing 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000154115 Papd5-004 ENSMUSG00000036779 10090 + 8:88251972-88257411 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000154115
Transcript ID Adipose Brain Breast Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000154115 3.841±0.69 13.020±0.00 5.570±0.08 3.459±0.47 6.431±1.16 7.999±1.15 6.159±0.22 12.051±5.30 10.279±3.10 36.937±11.15

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003PP CIL_0003PP_0002 CGP 8:88137855-88259722
CIL_0000OK CIL_0000OK_0002 CGP 8:88199213-88329962

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005575 ND cellular_component

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000357464 PAPD5-004 nonsense_mediated_decay Homo_sapiens 0 880
ENST00000436909 PAPD5-001 protein_coding Homo_sapiens 0 675
ENST00000561678 PAPD5-002 protein_coding Homo_sapiens 0 675
ENST00000562717 PAPD5-003 processed_transcript Homo_sapiens 0 281

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