C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATP-binding cassette, sub-family C (CFTR/MRP), member 12
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000156066 Abcc12-006 ENSMUSG00000036872 10090 - 8:86504583-86534747 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000156066
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000156066 0.057±0.05 0.051±0.02 0.020±0.00 0.148±0.06 0.032±0.01 0.055±0.00 0.031±0.02 0.017±0.01 0.047±0.05 0.045±0.02 0.019±0.00 0.066±0.03 0.805±1.30 14.704±5.64

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002VQ CIL_0002VQ_0002 CGP 8:85840959-86580686

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000311303 ABCC12-001 protein_coding Homo_sapiens 0 1116
ENST00000497206 ABCC12-002 nonsense_mediated_decay Homo_sapiens 0 1369
ENST00000529084 ABCC12-007 nonsense_mediated_decay Homo_sapiens 0 1369
ENST00000529504 ABCC12-004 nonsense_mediated_decay Homo_sapiens 0 1310
ENST00000532355 ABCC12-012 processed_transcript Homo_sapiens 0 202
ENST00000532494 ABCC12-005 nonsense_mediated_decay Homo_sapiens 0 1352
ENST00000534418 ABCC12-003 nonsense_mediated_decay Homo_sapiens 0 1264

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