C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATP-binding cassette, sub-family C (CFTR/MRP), member 12
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000131806 Abcc12-003 ENSMUSG00000036872 10090 - 8:86504841-86566590 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainLiverENSMUST00000131806
Transcript ID Adrenal Brain Liver
ENSMUST00000131806 0.041±0.02 0.046±0.00 0.007±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002VQ CIL_0002VQ_0002 CGP 8:85840959-86580686

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005524 IEA ATP binding
GO:0005739 IDA mitochondrion
GO:0006200 IEA ATP catabolic process
GO:0016021 IEA integral component of membrane
GO:0042626 IEA ATPase activity, coupled to transmembrane movement of substances
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000311303 ABCC12-001 protein_coding Homo_sapiens 0 2261
ENST00000497206 ABCC12-002 nonsense_mediated_decay Homo_sapiens 0 2309
ENST00000526251 ABCC12-006 retained_intron Homo_sapiens 0 475
ENST00000528693 ABCC12-009 retained_intron Homo_sapiens 0 1751
ENST00000529084 ABCC12-007 nonsense_mediated_decay Homo_sapiens 0 1746
ENST00000529504 ABCC12-004 nonsense_mediated_decay Homo_sapiens 0 2309
ENST00000532355 ABCC12-012 processed_transcript Homo_sapiens 0 202
ENST00000532494 ABCC12-005 nonsense_mediated_decay Homo_sapiens 0 2309
ENST00000533639 ABCC12-008 nonsense_mediated_decay Homo_sapiens 0 965
ENST00000534418 ABCC12-003 nonsense_mediated_decay Homo_sapiens 0 1430

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