C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RAB11 family interacting protein 3 (class II)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000037098 Rab11fip3 10090 - 17:25989036-26069409 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000118828 Rab11fip3-002 25989036-26021860 protein_coding
  ENSMUST00000120691 Rab11fip3-001 25989045-26069409 protein_coding
  ENSMUST00000122103 Rab11fip3-004 25989036-26069177 protein_coding
  ENSMUST00000126306 Rab11fip3-005 26036271-26069235 processed_transcript
  ENSMUST00000144587 Rab11fip3-003 26003651-26021818 retained_intron
  ENSMUST00000148021 Rab11fip3-006 26013845-26018460 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000118828ENSMUST00000120691ENSMUST00000122103ENSMUST00000126306
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000118828 2.807±0.00 4.684±1.83 2.210±0.00 N/A 4.590±2.12 3.538±0.24 2.951±0.77 213.307±20.13 0.701±0.41 3.118±0.01 N/A 5.720±2.30 10.667±6.68 6.201±0.82
ENSMUST00000120691 2.975±0.31 3.554±0.00 1.724±0.03 6.529±0.63 2.713±0.36 3.556±1.28 1.747±0.36 N/A 0.751±0.26 4.800±1.10 2.762±0.50 4.556±2.17 3.191±2.35 3.167±0.66
ENSMUST00000122103 5.862±1.35 3.429±0.66 5.564±0.13 47.763±48.16 4.669±2.38 2.609±0.22 6.060±1.53 N/A 1.078±0.73 7.852±0.76 15.053±3.72 4.650±1.74 4.051±2.38 1.960±0.35
ENSMUST00000126306 N/A 3.382±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000910 ISS cytokinesis
GO:0005509 IEA calcium ion binding
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005768 ISS endosome
GO:0005813 ISS centrosome
GO:0005815 IEA microtubule organizing center
GO:0016020 IDA membrane
GO:0017137 ISS Rab GTPase binding
GO:0030306 ISS ADP-ribosylation factor binding
GO:0030496 ISS midbody
GO:0032154 ISS cleavage furrow
GO:0032456 ISS endocytic recycling
GO:0042803 ISS protein homodimerization activity
GO:0043231 IEA intracellular membrane-bounded organelle
GO:0045171 IEA intercellular bridge
GO:0055037 ISS recycling endosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000016490 rab11fip3 RAB11 family interacting protein 3 (class II) protein_coding Danio_rerio
ENSG00000090565 RAB11FIP3 RAB11 family interacting protein 3 (class II) protein_coding Homo_sapiens

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