C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RAB11 family interacting protein 3 (class II)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000016490 rab11fip3 7955 + 24:39226376-39301267 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000010764 rab11fip3-201 39226376-39301267 protein_coding
  ENSDART00000136836 rab11fip3-001 39226376-39296371 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000010764
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000010764 5.884±2.43 0.293±0.10 0.787±0.25 0.145±0.00 0.082±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00031N CIL_00031N_0001 CGP 24:39212205-39301267

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000910 ISS cytokinesis
GO:0005509 IEA calcium ion binding
GO:0005737 IEA cytoplasm
GO:0005768 IEA endosome
GO:0005813 ISS centrosome
GO:0005856 IEA cytoskeleton
GO:0006810 IEA transport
GO:0007049 IEA cell cycle
GO:0016020 IEA membrane
GO:0017137 ISS Rab GTPase binding
GO:0030306 ISS ADP-ribosylation factor binding
GO:0030496 ISS midbody
GO:0032154 ISS cleavage furrow
GO:0032456 ISS endocytic recycling
GO:0042803 ISS protein homodimerization activity
GO:0046872 IEA metal ion binding
GO:0051301 IEA cell division
GO:0055037 ISS recycling endosome
GO:0055038 IEA recycling endosome membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000090565 RAB11FIP3 RAB11 family interacting protein 3 (class II) protein_coding Homo_sapiens
ENSMUSG00000037098 Rab11fip3 RAB11 family interacting protein 3 (class II) protein_coding Mus_musculus

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