C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Ral GTPase activating protein, alpha subunit 2 (catalytic)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000037110 Ralgapa2 10090 - 2:146239879-146512026 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000109982 Ralgapa2-003 146420078-146511911 retained_intron
  ENSMUST00000109986 Ralgapa2-001 146239879-146512004 protein_coding
  ENSMUST00000124583 Ralgapa2-002 146244784-146261375 processed_transcript
  ENSMUST00000124709 Ralgapa2-009 146484868-146512026 retained_intron
  ENSMUST00000131824 Ralgapa2-007 146248199-146511899 protein_coding
  ENSMUST00000135974 Ralgapa2-006 146429452-146512004 retained_intron
  ENSMUST00000146024 Ralgapa2-010 146404835-146412876 retained_intron
  ENSMUST00000146307 Ralgapa2-005 146258564-146387683 nonsense_mediated_decay
  ENSMUST00000148784 Ralgapa2-004 146360686-146406283 retained_intron
  ENSMUST00000149499 Ralgapa2-008 146243976-146447292 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000109986ENSMUST00000124709ENSMUST00000131824ENSMUST00000146024ENSMUST00000149499
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000109986 3.764±0.81 1.773±0.08 0.989±0.29 3.036±2.11 3.538±2.25 2.683±1.60 1.541±0.28 1.611±0.49 0.718±0.45 2.836±0.72 0.791±0.10 2.458±0.40 0.886±0.45 0.612±0.10
ENSMUST00000124709 N/A 13.297±2.31 N/A N/A N/A 21.201±0.00 N/A N/A N/A N/A N/A 8.867±0.85 N/A N/A
ENSMUST00000131824 N/A N/A N/A N/A N/A N/A N/A N/A 0.612±0.00 N/A N/A N/A 0.274±0.00 N/A
ENSMUST00000146024 N/A 8.338±0.00 N/A N/A N/A 16.694±0.00 N/A N/A N/A N/A N/A 8.128±0.00 4.410±0.00 9.081±0.00
ENSMUST00000149499 N/A 1.075±0.00 N/A 0.656±0.00 2.318±0.39 2.874±0.72 N/A 2.429±0.00 1.208±0.39 N/A N/A 1.501±0.27 0.622±0.14 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007R6 CIL_0007R6_0002 VISTA 2:146024701-146625932
CIL_0001TW CIL_0001TW_0002 CGP 2:146221921-146512026
CIL_0007A2 CIL_0007A2_0003 CGP 2:146239879-146970097

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005615 IEA extracellular space
GO:0005737 IEA cytoplasm
GO:0005829 TAS cytosol
GO:0005886 IEA plasma membrane
GO:0017123 ISS Ral GTPase activator activity
GO:0032484 IMP Ral protein signal transduction
GO:0032859 ISS activation of Ral GTPase activity
GO:0032880 IMP regulation of protein localization
GO:0046982 ISS protein heterodimerization activity
GO:0060178 IMP regulation of exocyst localization

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000005861 ralgapa2 Ral GTPase activating protein, alpha subunit 2 (catalytic) protein_coding Danio_rerio
ENSG00000188559 RALGAPA2 Ral GTPase activating protein, alpha subunit 2 (catalytic) protein_coding Homo_sapiens

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