C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Ral GTPase activating protein, alpha subunit 2 (catalytic)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000109986 Ralgapa2-001 ENSMUSG00000037110 10090 - 2:146239879-146512004 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000109986
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000109986 3.764±0.81 1.773±0.08 0.989±0.29 3.036±2.11 3.538±2.25 2.683±1.60 1.541±0.28 1.611±0.49 0.718±0.45 2.836±0.72 0.791±0.10 2.458±0.40 0.886±0.45 0.612±0.10

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007R6 CIL_0007R6_0002 VISTA 2:146024701-146625932
CIL_0001TW CIL_0001TW_0002 CGP 2:146221921-146512026
CIL_0007A2 CIL_0007A2_0003 CGP 2:146239879-146970097

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005615 IEA extracellular space
GO:0005737 IEA cytoplasm
GO:0005886 IEA plasma membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000154984 ralgapa1-001 protein_coding Danio_rerio 0.0000000002 75
ENSDART00000112469 ralgapa1-201 protein_coding Danio_rerio 0.0000000006 73
ENSDART00000124584 ralgapa1-202 protein_coding Danio_rerio 0.0000000006 73
ENST00000202677 RALGAPA2-008 protein_coding Homo_sapiens 0 3853
ENST00000424981 RALGAPA2-005 retained_intron Homo_sapiens 0 798
ENST00000427175 RALGAPA2-007 protein_coding Homo_sapiens 0 1005
ENST00000430436 RALGAPA2-002 protein_coding Homo_sapiens 0 3797
ENST00000495793 RALGAPA2-003 processed_transcript Homo_sapiens 0 446
ENST00000620717 RALGAPA2-201 protein_coding Homo_sapiens 0 1253

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