C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Ral GTPase activating protein, alpha subunit 2 (catalytic)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000131824 Ralgapa2-007 ENSMUSG00000037110 10090 - 2:146248199-146511899 protein_coding

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverPlacentaENSMUST00000131824
Transcript ID Liver Placenta
ENSMUST00000131824 0.612±0.00 0.274±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007R6 CIL_0007R6_0002 VISTA 2:146024701-146625932
CIL_0001TW CIL_0001TW_0002 CGP 2:146221921-146512026
CIL_0007A2 CIL_0007A2_0003 CGP 2:146239879-146970097

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 ISS cytoplasm
GO:0005829 TAS cytosol
GO:0017123 ISS Ral GTPase activator activity
GO:0032484 IMP Ral protein signal transduction
GO:0032859 ISS activation of Ral GTPase activity
GO:0032880 IMP regulation of protein localization
GO:0046982 ISS protein heterodimerization activity
GO:0060178 IMP regulation of exocyst localization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000112469 ralgapa1-201 protein_coding Danio_rerio 0.0000000003 73
ENSDART00000124584 ralgapa1-202 protein_coding Danio_rerio 0.0000000003 73
ENSDART00000154984 ralgapa1-001 protein_coding Danio_rerio 0.0000000003 73
ENST00000202677 RALGAPA2-008 protein_coding Homo_sapiens 0 6798
ENST00000424981 RALGAPA2-005 retained_intron Homo_sapiens 0 798
ENST00000427175 RALGAPA2-007 protein_coding Homo_sapiens 0 1005
ENST00000430436 RALGAPA2-002 protein_coding Homo_sapiens 0 5923
ENST00000495793 RALGAPA2-003 processed_transcript Homo_sapiens 0 446
ENST00000620717 RALGAPA2-201 protein_coding Homo_sapiens 0 1210

Loading