C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: jade family PHD finger 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000115384 Jade3-001 ENSMUSG00000037315 10090 + X:20425688-20519939 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000115384
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000115384 0.534±0.19 0.348±0.11 2.878±0.45 1.325±0.70 0.287±0.14 0.350±0.26 0.211±0.04 0.439±0.10 1.278±1.20 0.919±0.11 0.077±0.03 1.573±1.37 31.573±2.79 1.857±0.76

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005G5 CIL_0005G5_0002 CGP X:20364481-20519939
CIL_0005G4 CIL_0005G4_0002 CGP X:20425688-20562089

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0008270 IEA zinc ion binding
GO:0043966 ISS histone H3 acetylation
GO:0043981 ISS histone H4-K5 acetylation
GO:0043982 ISS histone H4-K8 acetylation
GO:0043983 ISS histone H4-K12 acetylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000424392 JADE3-002 protein_coding Homo_sapiens 0 652
ENST00000611250 JADE3-201 protein_coding Homo_sapiens 0 3768
ENST00000614628 JADE3-001 protein_coding Homo_sapiens 0 3770

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