C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transporter 1, ATP-binding cassette, sub-family B (MDR/TAP)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000037321 Tap1 10090 + 17:34187553-34197225 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000041633 Tap1-005 34187802-34197219 protein_coding
  ENSMUST00000166287 Tap1-002 34187728-34192276 retained_intron
  ENSMUST00000166582 Tap1-006 34193054-34196587 retained_intron
  ENSMUST00000166853 Tap1-003 34187734-34197225 retained_intron
  ENSMUST00000168351 Tap1-004 34189891-34197220 retained_intron
  ENSMUST00000170086 Tap1-001 34187553-34197225 protein_coding
  ENSMUST00000171148 Tap1-007 34190752-34193568 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000041633ENSMUST00000166582ENSMUST00000166853ENSMUST00000168351ENSMUST00000170086ENSMUST00000171148
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000041633 N/A N/A N/A 0.284±0.00 N/A N/A N/A N/A N/A N/A 0.492±0.20 N/A 1.550±0.03 0.100±0.05
ENSMUST00000166582 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.725±0.00
ENSMUST00000166853 N/A N/A N/A N/A 8.122±3.20 N/A 1.215±0.00 N/A N/A N/A 0.185±0.00 1.963±0.00 N/A N/A
ENSMUST00000168351 N/A N/A N/A 0.253±0.00 4.583±0.00 N/A N/A N/A N/A N/A 0.704±0.23 1.885±0.69 N/A 0.128±0.00
ENSMUST00000170086 19.716±0.41 18.012±2.26 11.769±2.13 0.426±0.12 28.649±9.87 11.251±2.74 3.691±0.72 6.375±0.68 5.645±2.77 19.185±1.85 1.098±0.56 9.371±3.05 5.939±4.32 0.231±0.05
ENSMUST00000171148 N/A N/A N/A 1.596±0.00 N/A N/A N/A N/A N/A N/A N/A 13.743±0.00 7.292±2.08 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000423 CIL_000423_0002 CGP 17:34181988-34197225

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005739 IDA mitochondrion
GO:0006200 IEA ATP catabolic process
GO:0006952 IMP defense response
GO:0015197 IEA peptide transporter activity
GO:0015833 IEA peptide transport
GO:0016020 IEA membrane
GO:0016021 IBA integral component of membrane
GO:0019060 IEA intracellular transport of viral protein in host cell
GO:0023029 IEA MHC class Ib protein binding
GO:0030670 TAS phagocytic vesicle membrane
GO:0042288 IPI MHC class I protein binding
GO:0042626 IBA ATPase activity, coupled to transmembrane movement of substances
GO:0043531 IEA ADP binding
GO:0046967 IEA cytosol to ER transport
GO:0046979 IEA TAP2 binding
GO:0055085 IBA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000079766 tap1 transporter 1, ATP-binding cassette, sub-family B (MDR/TAP) protein_coding Danio_rerio
ENSG00000168394 TAP1 transporter 1, ATP-binding cassette, sub-family B (MDR/TAP) protein_coding Homo_sapiens

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