C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transporter 1, ATP-binding cassette, sub-family B (MDR/TAP)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000170086 Tap1-001 ENSMUSG00000037321 10090 + 17:34187553-34197225 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000170086
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000170086 19.716±0.41 18.012±2.26 11.769±2.13 0.426±0.12 28.649±9.87 11.251±2.74 3.691±0.72 6.375±0.68 5.645±2.77 19.185±1.85 1.098±0.56 9.371±3.05 5.939±4.32 0.231±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000423 CIL_000423_0002 CGP 17:34181988-34197225

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005739 IDA mitochondrion
GO:0006200 IEA ATP catabolic process
GO:0006952 IMP defense response
GO:0015197 IEA peptide transporter activity
GO:0015833 IEA peptide transport
GO:0016020 IEA membrane
GO:0016021 IBA integral component of membrane
GO:0019060 IEA intracellular transport of viral protein in host cell
GO:0023029 IEA MHC class Ib protein binding
GO:0030670 TAS phagocytic vesicle membrane
GO:0042288 IPI MHC class I protein binding
GO:0042626 IBA ATPase activity, coupled to transmembrane movement of substances
GO:0043531 IEA ADP binding
GO:0046967 IEA cytosol to ER transport
GO:0046979 IEA TAP2 binding
GO:0055085 IBA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000354258 TAP1-001 protein_coding Homo_sapiens 0 1482
ENST00000383235 TAP1-001 protein_coding Homo_sapiens 0 1482
ENST00000414467 TAP1-001 protein_coding Homo_sapiens 0 1482
ENST00000418205 TAP1-001 protein_coding Homo_sapiens 0 1482
ENST00000424897 TAP1-001 protein_coding Homo_sapiens 0 1482
ENST00000428324 TAP1-001 protein_coding Homo_sapiens 0 1482
ENST00000439781 TAP1-001 protein_coding Homo_sapiens 0 1482
ENST00000440894 TAP1-001 protein_coding Homo_sapiens 0 1482
ENST00000468609 TAP1-003 retained_intron Homo_sapiens 0 219
ENST00000469192 TAP1-003 retained_intron Homo_sapiens 0 219
ENST00000470021 TAP1-003 retained_intron Homo_sapiens 0 219
ENST00000470332 TAP1-002 retained_intron Homo_sapiens 0 754
ENST00000470845 TAP1-002 retained_intron Homo_sapiens 0 754
ENST00000481178 TAP1-003 retained_intron Homo_sapiens 0 219
ENST00000483345 TAP1-002 retained_intron Homo_sapiens 0 754
ENST00000486332 TAP1-002 retained_intron Homo_sapiens 0 754
ENST00000486849 TAP1-003 retained_intron Homo_sapiens 0 219
ENST00000487296 TAP1-003 retained_intron Homo_sapiens 0 219
ENST00000489513 TAP1-002 retained_intron Homo_sapiens 0 754
ENST00000489659 TAP1-002 retained_intron Homo_sapiens 0 754
ENST00000490601 TAP1-003 retained_intron Homo_sapiens 0 219
ENST00000493421 TAP1-002 retained_intron Homo_sapiens 0 754
ENST00000494196 TAP1-003 retained_intron Homo_sapiens 0 219
ENST00000498427 TAP1-002 retained_intron Homo_sapiens 0 754

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