C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transporter 1, ATP-binding cassette, sub-family B (MDR/TAP)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000166853 Tap1-003 ENSMUSG00000037321 10090 + 17:34187734-34197225 retained_intron

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastHeartMuscleOvaryENSMUST00000166853
Transcript ID Breast Heart Muscle Ovary
ENSMUST00000166853 8.122±3.20 1.215±0.00 0.185±0.00 1.963±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000423 CIL_000423_0002 CGP 17:34181988-34197225

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000354258 TAP1-001 protein_coding Homo_sapiens 0 1147
ENST00000383235 TAP1-001 protein_coding Homo_sapiens 0 1147
ENST00000414467 TAP1-001 protein_coding Homo_sapiens 0 1147
ENST00000418205 TAP1-001 protein_coding Homo_sapiens 0 1147
ENST00000424897 TAP1-001 protein_coding Homo_sapiens 0 1147
ENST00000428324 TAP1-001 protein_coding Homo_sapiens 0 1147
ENST00000439781 TAP1-001 protein_coding Homo_sapiens 0 1147
ENST00000440894 TAP1-001 protein_coding Homo_sapiens 0 1147
ENST00000468609 TAP1-003 retained_intron Homo_sapiens 0 219
ENST00000469192 TAP1-003 retained_intron Homo_sapiens 0 219
ENST00000470021 TAP1-003 retained_intron Homo_sapiens 0 219
ENST00000470332 TAP1-002 retained_intron Homo_sapiens 0 754
ENST00000470845 TAP1-002 retained_intron Homo_sapiens 0 754
ENST00000481178 TAP1-003 retained_intron Homo_sapiens 0 219
ENST00000483345 TAP1-002 retained_intron Homo_sapiens 0 754
ENST00000486332 TAP1-002 retained_intron Homo_sapiens 0 754
ENST00000486849 TAP1-003 retained_intron Homo_sapiens 0 219
ENST00000487296 TAP1-003 retained_intron Homo_sapiens 0 219
ENST00000489513 TAP1-002 retained_intron Homo_sapiens 0 754
ENST00000489659 TAP1-002 retained_intron Homo_sapiens 0 754
ENST00000490601 TAP1-003 retained_intron Homo_sapiens 0 219
ENST00000493421 TAP1-002 retained_intron Homo_sapiens 0 754
ENST00000494196 TAP1-003 retained_intron Homo_sapiens 0 219
ENST00000498427 TAP1-002 retained_intron Homo_sapiens 0 754

Loading