C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ARP1 actin-related protein 1B, centractin beta
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000043951 Actr1b-001 ENSMUSG00000037351 10090 - 1:36698116-36710008 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000043951
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000043951 43.090±1.87 85.892±1.03 42.962±4.81 54.071±12.84 40.503±15.29 94.916±5.23 32.816±2.63 57.673±4.73 25.665±6.95 49.522±3.50 39.335±2.32 53.793±25.09 25.432±5.24 12.829±5.83

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002U7 CIL_0002U7_0002 CGP 1:36691487-36714422
CIL_0002U8 CIL_0002U8_0002 CGP 1:36698116-36782816

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005737 IEA cytoplasm
GO:0005813 IEA centrosome
GO:0008150 ND biological_process
GO:0016020 IEA membrane
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000010420 actr1-001 protein_coding Danio_rerio 0 778
ENSDART00000075303 actr1-002 protein_coding Danio_rerio 0 689
ENST00000289228 ACTR1B-001 protein_coding Homo_sapiens 0 1596
ENST00000451664 ACTR1B-002 retained_intron Homo_sapiens 0 632
ENST00000460427 ACTR1B-003 retained_intron Homo_sapiens 0 327

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