C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: vacuolar protein sorting 13B (yeast)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000037646 Vps13b 10090 + 15:35371546-35931228 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000048646 Vps13b-201 35371546-35931228 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungOvaryPlacentaTestisENSMUST00000048646
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000048646 5.963±2.26 4.532±0.63 3.726±0.00 2.690±0.26 3.435±0.22 5.015±1.29 4.585±0.35 2.906±0.32 4.305±0.80 4.210±1.30 2.605±0.85 4.090±1.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00090P CIL_00090P_0002 VISTA 15:35232217-35834804
CIL_00026G CIL_00026G_0002 CGP 15:35296098-35931228
CIL_0006JN CIL_0006JN_0002 CGP 15:35371546-35938246

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000086406 vacuolar protein sorting 13 homolog B (yeast) protein_coding Danio_rerio
ENSDARG00000086745 VPS13B (1 of 4) vacuolar protein sorting 13 homolog B (yeast) protein_coding Danio_rerio
ENSDARG00000087039 VPS13B (2 of 4) vacuolar protein sorting 13 homolog B (yeast) protein_coding Danio_rerio
ENSDARG00000090225 CABZ01111454.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000091054 VPS13B (4 of 4) vacuolar protein sorting 13 homolog B (yeast) protein_coding Danio_rerio
ENSG00000132549 VPS13B vacuolar protein sorting 13 homolog B (yeast) protein_coding Homo_sapiens

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