C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00026G_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000164920-ENSG00000132549 CGP 9606 8:98944403-99877580
GeneTranscriptPositionBiotype
ENSG00000164919 (COX6C)
cytochrome c oxidase subunit VIc 		ENST00000297564 (COX6C-003) 99878148-99893684 protein_coding
ENST00000517682 (COX6C-005) 99878149-99893681 protein_coding
ENST00000518171 (COX6C-002) 99885992-99893697 protein_coding
ENST00000520271 (COX6C-007) 99878149-99893622 protein_coding
ENST00000520468 (COX6C-001) 99877866-99894062 protein_coding
ENST00000520517 (COX6C-009) 99874996-99893707 nonsense_mediated_decay
ENST00000522934 (COX6C-010) 99873200-99893706 nonsense_mediated_decay
ENST00000522940 (COX6C-006) 99878151-99893623 protein_coding
ENST00000523016 (COX6C-004) 99887061-99893680 protein_coding
ENST00000524245 (COX6C-008) 99878150-99893135 protein_coding
ENST00000606245 (COX6C-011) 99878149-99878794 retained_intron
ENSG00000164920 (OSR2)
odd-skipped related transciption factor 2 		ENST00000297565 (OSR2-002) 98944442-98952104 protein_coding
ENST00000435298 (OSR2-001) 98944458-98952100 protein_coding
ENST00000457907 (OSR2-201) 98944403-98952104 protein_coding
ENST00000518199 (OSR2-009) 98948392-98949591 protein_coding
ENST00000520722 (OSR2-008) 98944446-98949307 processed_transcript
ENST00000520791 (OSR2-005) 98944403-98946302 processed_transcript
ENST00000520951 (OSR2-006) 98948222-98949604 protein_coding
ENST00000521044 (OSR2-007) 98944456-98949321 processed_transcript
ENST00000522510 (OSR2-003) 98944659-98951762 protein_coding
ENST00000523368 (OSR2-004) 98944442-98951022 protein_coding
ENSG00000225017 (AP004289.1)
 ENST00000436307 (AP004289.1-001) 99346052-99348256 processed_pseudogene
ENSG00000229625 (RP11-44N12.2)
 ENST00000420417 (RP11-44N12.2-001) 98961428-98968284 lincRNA
ENSG00000235683 (AC018442.1)
 ENST00000421439 (AC018442.1-001) 99695957-99698017 processed_pseudogene
ENSG00000236583 (AP004290.1)
 ENST00000440915 (AP004290.1-001) 99233048-99234459 processed_pseudogene
ENSG00000237704 (AP004289.2)
 ENST00000444413 (AP004289.2-001) 99340305-99341761 processed_pseudogene
ENSG00000243254 (RN7SL350P)
RNA, 7SL, cytoplasmic 350, pseudogene 		ENST00000492591 (RN7SL350P-201) 99613783-99614081 misc_RNA
ENSG00000253180 (RP11-410L14.1)
 ENST00000517978 (RP11-410L14.1-001) 99003407-99003842 processed_pseudogene
ENSG00000253532 (CTD-2340D6.1)
 ENST00000523226 (CTD-2340D6.1-001) 99119352-99120581 sense_intronic
ENSG00000253539 (RP11-402L5.1)
 ENST00000523658 (RP11-402L5.1-001) 99796615-99799187 antisense
ENSG00000253562 (CTD-2340D6.2)
 ENST00000520844 (CTD-2340D6.2-001) 99091738-99094060 antisense
ENSG00000253912 (RP11-402L5.2)
 ENST00000523025 (RP11-402L5.2-001) 99804159-99804341 processed_pseudogene
ENSG00000253948 (RP11-410L14.2)
 ENST00000521696 (RP11-410L14.2-001) 98996763-99013044 lincRNA
ENSG00000263842 (AC104986.1)
 ENST00000581071 (AC104986.1-201) 98999284-98999401 miRNA
CIL_00026G_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000022330-ENSMUSG00000037646 CGP 10090 15:35296098-35931228
GeneTranscriptPositionBiotype
ENSMUSG00000014313 (Cox6c)
cytochrome c oxidase subunit VIc 		ENSMUST00000014457 (Cox6c-001) 35931976-35938246 protein_coding
ENSMUST00000127999 (Cox6c-002) 35931983-35938207 retained_intron
ENSMUST00000153512 (Cox6c-004) 35931980-35937645 protein_coding
ENSMUST00000155638 (Cox6c-005) 35925886-35935331 nonsense_mediated_decay
ENSMUST00000156915 (Cox6c-003) 35935387-35938009 protein_coding
ENSMUSG00000022330 (Osr2)
odd-skipped related 2 		ENSMUST00000022952 (Osr2-201) 35296098-35303304 protein_coding
ENSMUSG00000037646 (Vps13b)
vacuolar protein sorting 13B (yeast) 		ENSMUST00000048646 (Vps13b-201) 35371546-35931228 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00026G_0001ENSG00000164919ENST00000297564ENST00000517682ENST00000518171ENST00000520271ENST00000520468ENST00000520517ENST00000522934ENST00000522940ENST00000523016ENST00000524245ENST00000606245ENSG00000164920ENST00000297565ENST00000435298ENST00000457907ENST00000518199ENST00000520722ENST00000520791ENST00000520951ENST00000521044ENST00000522510ENST00000523368ENSG00000225017ENST00000436307ENSG00000229625ENST00000420417ENSG00000235683ENST00000421439ENSG00000236583ENST00000440915ENSG00000237704ENST00000444413ENSG00000243254ENST00000492591ENSG00000253180ENST00000517978ENSG00000253532ENST00000523226ENSG00000253539ENST00000523658ENSG00000253562ENST00000520844ENSG00000253912ENST00000523025ENSG00000253948ENST00000521696ENSG00000263842ENST00000581071CIL_00026G_0002ENSMUSG00000014313ENSMUST00000014457ENSMUST00000127999ENSMUST00000153512ENSMUST00000155638ENSMUST00000156915ENSMUSG00000022330ENSMUST00000022952ENSMUSG00000037646ENSMUST00000048646
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00026G_0001ENSG00000164919ENST00000297564ENST00000517682ENST00000518171ENST00000520271ENST00000520517ENST00000522934ENSG00000164920ENST00000297565ENST00000435298ENST00000457907ENST00000518199ENST00000520722ENST00000520951ENST00000522510ENSG00000225017ENST00000436307ENSG00000229625ENST00000420417ENSG00000235683ENST00000421439ENSG00000236583ENST00000440915ENSG00000237704ENST00000444413ENSG00000243254ENST00000492591ENSG00000253180ENST00000517978ENSG00000253532ENST00000523226ENSG00000253539ENST00000523658ENSG00000253562ENST00000520844ENSG00000253912ENST00000523025ENSG00000253948ENST00000521696ENSG00000263842ENST00000581071CIL_00026G_0002ENSMUSG00000014313ENSMUST00000014457ENSMUSG00000022330ENSMUST00000022952ENSMUSG00000037646ENSMUST00000048646
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000164919 ENST00000297564 N/A N/A N/A N/A N/A N/A 163.040±0.00 N/A 24.121±0.00 44.945±0.00 46.967±0.00 N/A N/A N/A
ENST00000517682 29.336±0.00 55.493±0.00 29.183±0.00 193.626±36.26 60.370±11.41 152.409±52.28 153.811±60.63 133.157±23.37 78.454±23.11 53.482±30.51 157.465±124.84 147.813±89.09 123.296±16.91 68.323±29.57
ENST00000518171 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 176.703±0.00 95.168±0.00 85.282±0.00
ENST00000520271 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 65.820±0.00 N/A N/A
ENST00000520468 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520517 21.416±0.00 N/A 15.497±0.00 57.090±0.00 22.059±0.00 N/A N/A N/A N/A 48.509±0.00 N/A 33.985±0.00 N/A 17.963±0.00
ENST00000522934 N/A 46.758±0.00 N/A 235.993±0.00 41.986±0.00 52.697±0.00 72.214±32.25 55.841±0.00 31.213±17.80 N/A 50.259±40.54 76.657±6.12 16.402±0.00 36.904±0.00
ENST00000522940 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523016 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000524245 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000606245 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000164920 ENST00000297565 N/A N/A N/A N/A N/A N/A 0.339±0.00 0.582±0.00 N/A N/A 1.171±0.00 9.100±6.70 2.740±0.62 N/A
ENST00000435298 8.665±0.00 3.745±0.00 N/A N/A 1.818±1.45 1.198±0.82 0.924±0.00 N/A 1.364±0.00 1.025±0.00 N/A 21.530±19.69 7.635±2.28 22.170±10.41
ENST00000457907 N/A N/A N/A N/A N/A 0.129±0.00 N/A N/A 0.253±0.00 0.670±0.00 N/A 0.755±0.00 N/A N/A
ENST00000518199 N/A N/A N/A N/A N/A N/A N/A N/A 0.485±0.00 0.530±0.00 N/A N/A N/A N/A
ENST00000520722 22.947±0.00 10.455±0.00 N/A N/A 8.241±0.00 N/A 0.398±0.00 N/A N/A N/A N/A 96.253±0.00 N/A 75.279±0.00
ENST00000520791 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520951 N/A N/A N/A 0.043±0.00 1.528±0.00 N/A 0.104±0.00 N/A N/A 1.133±0.00 0.782±0.00 N/A N/A N/A
ENST00000521044 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522510 3.554±0.00 2.606±0.00 N/A N/A 1.674±0.00 2.487±0.00 N/A N/A 0.095±0.00 N/A N/A N/A N/A 26.165±0.00
ENST00000523368 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000225017 ENST00000436307 0.006±0.00 N/A 0.199±0.00 0.033±0.01 0.176±0.15 0.133±0.00 0.084±0.06 0.037±0.00 0.037±0.00 N/A 0.051±0.00 0.082±0.06 N/A N/A
ENSG00000229625 ENST00000420417 0.193±0.00 0.474±0.00 N/A 0.385±0.00 0.081±0.00 N/A 0.257±0.00 0.120±0.00 N/A 0.144±0.00 0.453±0.00 0.359±0.24 0.506±0.49 1.409±1.12
ENSG00000235683 ENST00000421439 0.064±0.00 0.021±0.00 N/A 0.118±0.00 0.413±0.00 0.057±0.05 0.091±0.04 0.328±0.00 0.565±0.00 0.342±0.26 0.089±0.00 0.166±0.16 0.025±0.00 0.169±0.15
ENSG00000236583 ENST00000440915 0.021±0.00 0.103±0.00 0.109±0.00 N/A 0.122±0.06 0.263±0.25 0.030±0.01 N/A 0.078±0.00 0.253±0.00 N/A 0.111±0.12 N/A N/A
ENSG00000237704 ENST00000444413 0.042±0.00 N/A 0.025±0.00 0.122±0.00 0.104±0.00 0.230±0.00 0.055±0.00 N/A 0.112±0.00 0.120±0.00 N/A 0.060±0.00 N/A 0.024±0.00
ENSG00000243254 ENST00000492591 N/A N/A N/A N/A 0.471±0.00 N/A N/A N/A N/A 0.640±0.00 N/A N/A N/A N/A
ENSG00000253180 ENST00000517978 N/A 0.026±0.00 N/A 0.103±0.03 0.256±0.00 0.186±0.00 0.086±0.03 0.225±0.00 N/A 0.192±0.00 N/A 0.200±0.14 0.072±0.00 0.274±0.00
ENSG00000253532 ENST00000523226 0.123±0.00 0.169±0.00 0.179±0.00 0.161±0.00 0.567±0.46 0.358±0.29 0.091±0.00 N/A 0.181±0.00 0.151±0.03 0.017±0.00 0.299±0.00 N/A 0.054±0.00
ENSG00000253539 ENST00000523658 N/A 0.086±0.00 1.329±0.00 N/A 0.387±0.00 0.526±0.00 0.540±0.00 N/A 1.324±1.29 N/A N/A 0.607±0.33 0.133±0.00 0.039±0.00
ENSG00000253562 ENST00000520844 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.581±0.00 N/A 0.086±0.06 N/A 0.134±0.00
ENSG00000253912 ENST00000523025 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.150±0.00 0.362±0.00 0.380±0.00
ENSG00000253948 ENST00000521696 0.849±0.00 0.794±0.00 N/A 3.221±0.67 0.208±0.00 2.059±0.00 0.631±0.39 0.934±0.00 0.382±0.35 0.282±0.13 1.220±0.69 2.089±1.95 0.555±0.51 2.078±0.34
ENSG00000263842 ENST00000581071 N/A N/A N/A N/A 0.625±0.00 N/A N/A 0.307±0.00 N/A N/A N/A 1.283±0.00 N/A 0.139±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000014313 ENSMUST00000014457 227.119±24.48 223.386±15.93 827.626±36.19 264.436±79.53 200.455±92.71 401.439±86.96 1407.642±314.46 1081.686±284.50 447.465±111.97 198.097±12.56 794.589±62.32 241.189±159.56 285.812±77.07 318.853±82.35
ENSMUST00000127999 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153512 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155638 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156915 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000022330 ENSMUST00000022952 50.443±49.40 28.419±9.87 0.238±0.00 0.924±0.15 5.453±2.94 13.692±4.80 0.062±0.04 11.804±2.33 0.087±0.06 0.799±0.41 0.474±0.09 27.008±11.18 1.007±0.73 3.161±1.42
ENSMUSG00000037646 ENSMUST00000048646 5.963±2.26 4.532±0.63 3.726±0.00 2.690±0.26 3.435±0.22 5.015±1.29 N/A 4.585±0.35 2.906±0.32 4.305±0.80 N/A 4.210±1.30 2.605±0.85 4.090±1.12

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