C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein phosphatase 1, regulatory (inhibitor) subunit 16B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000052927 Ppp1r16b-001 ENSMUSG00000037754 10090 + 2:158665398-158766334 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonOvaryPlacentaTestisENSMUST00000052927
Transcript ID Colon Ovary Placenta Testis
ENSMUST00000052927 0.172±0.00 1.160±0.00 0.094±0.00 0.088±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00081Y CIL_00081Y_0002 VISTA 2:158139041-158740388
CIL_0004EB CIL_0004EB_0002 CGP 2:158624888-158766334
CIL_0003RW CIL_0003RW_0002 CGP 2:158665398-158786637

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 ISS nucleus
GO:0005886 ISS plasma membrane
GO:0051489 ISS regulation of filopodium assembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000299824 PPP1R16B-001 protein_coding Homo_sapiens 0 2390
ENST00000373331 PPP1R16B-004 protein_coding Homo_sapiens 0 1219
ENST00000463749 PPP1R16B-003 processed_transcript Homo_sapiens 0 254

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