C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: NEDD4 binding protein 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000037795 N4bp2 10090 + 5:65763521-65830108 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000087264 N4bp2-201 65764120-65826650 protein_coding
  ENSMUST00000113738 N4bp2-001 65763521-65830108 protein_coding
  ENSMUST00000127411 N4bp2-005 65809731-65815058 retained_intron
  ENSMUST00000136674 N4bp2-006 65825242-65826874 retained_intron
  ENSMUST00000137190 N4bp2-003 65763979-65786259 processed_transcript
  ENSMUST00000138239 N4bp2-002 65764120-65817284 protein_coding
  ENSMUST00000138607 N4bp2-004 65763979-65775894 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000087264ENSMUST00000113738ENSMUST00000138239ENSMUST00000138607
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000087264 N/A N/A 1.263±0.00 N/A N/A N/A N/A N/A N/A N/A 0.162±0.00 1.523±0.22 N/A 2.538±1.63
ENSMUST00000113738 0.200±0.00 1.820±0.26 0.359±0.00 5.236±4.34 1.494±0.66 1.275±0.19 0.354±0.19 1.768±0.21 3.292±1.78 1.154±0.46 0.168±0.00 2.238±0.66 6.971±3.94 2.096±0.76
ENSMUST00000138239 N/A N/A N/A 2.061±0.00 N/A N/A N/A 0.469±0.00 N/A 0.821±0.00 0.187±0.00 2.474±0.00 11.806±0.00 1.038±0.00
ENSMUST00000138607 N/A N/A N/A N/A 3.211±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002TY CIL_0002TY_0003 CGP 5:65615260-65830108
CIL_0005LM CIL_0005LM_0003 CGP 5:65763521-65896700

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004519 IEA endonuclease activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005829 IDA cytosol
GO:0016310 IEA phosphorylation
GO:0046404 IEA ATP-dependent polydeoxyribonucleotide 5'-hydroxyl-kinase activity
GO:0090305 IEA nucleic acid phosphodiester bond hydrolysis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000061451 n4bp2 NEDD4 binding protein 2 protein_coding Danio_rerio
ENSG00000078177 N4BP2 NEDD4 binding protein 2 protein_coding Homo_sapiens

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