C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: NEDD4 binding protein 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000078177 N4BP2 9606 + 4:40056826-40158252 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000261435 N4BP2-001 40056826-40158252 protein_coding
  ENST00000511480 N4BP2-002 40056913-40158251 nonsense_mediated_decay
  ENST00000513269 N4BP2-003 40102907-40155397 protein_coding
  ENST00000515550 N4BP2-004 40056936-40102606 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000261435ENST00000511480ENST00000513269
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000261435 0.274±0.00 0.158±0.00 N/A 0.048±0.00 0.505±0.05 1.292±0.00 0.291±0.01 0.796±0.72 0.495±0.38 2.066±0.00 0.390±0.00 0.569±0.29 0.593±0.51 0.812±0.00
ENST00000511480 N/A N/A N/A 0.384±0.00 0.603±0.00 0.508±0.00 N/A N/A N/A N/A N/A 0.217±0.13 0.448±0.00 0.364±0.00
ENST00000513269 N/A N/A 0.393±0.00 0.087±0.00 0.775±0.00 0.845±0.00 N/A 2.444±0.00 N/A N/A N/A 0.501±0.22 0.688±0.00 1.302±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002TY CIL_0002TY_0002 CGP 4:39822863-40158252
CIL_0005LM CIL_0005LM_0002 CGP 4:40056826-40246967

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004519 IDA endonuclease activity
GO:0005515 IPI:IEA protein binding
GO:0005524 IDA ATP binding
GO:0005829 IEA cytosol
GO:0016310 IDA phosphorylation
GO:0046404 IDA ATP-dependent polydeoxyribonucleotide 5'-hydroxyl-kinase activity
GO:0090305 IDA nucleic acid phosphodiester bond hydrolysis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000061451 n4bp2 NEDD4 binding protein 2 protein_coding Danio_rerio
ENSMUSG00000037795 N4bp2 NEDD4 binding protein 2 protein_coding Mus_musculus

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