C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: NEDD4 binding protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000113738 N4bp2-001 ENSMUSG00000037795 10090 + 5:65763521-65830108 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000113738
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000113738 0.200±0.00 1.820±0.26 0.359±0.00 5.236±4.34 1.494±0.66 1.275±0.19 0.354±0.19 1.768±0.21 3.292±1.78 1.154±0.46 0.168±0.00 2.238±0.66 6.971±3.94 2.096±0.76

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002TY CIL_0002TY_0003 CGP 5:65615260-65830108
CIL_0005LM CIL_0005LM_0003 CGP 5:65763521-65896700

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004519 IEA endonuclease activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005829 IDA cytosol
GO:0016310 IEA phosphorylation
GO:0046404 IEA ATP-dependent polydeoxyribonucleotide 5'-hydroxyl-kinase activity
GO:0090305 IEA nucleic acid phosphodiester bond hydrolysis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000261435 N4BP2-001 protein_coding Homo_sapiens 0 2093
ENST00000511480 N4BP2-002 nonsense_mediated_decay Homo_sapiens 0 2093
ENST00000513269 N4BP2-003 protein_coding Homo_sapiens 0 1472

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